Gene
| Gene Model ID | pfu_aug1.0_5052.1_45100 |
|---|---|
| Locus | scaffold5052.1 : 5486 ... 8672 : + |
| To GenomeBrowser | scaffold5052.1:5486..8672 |
| Genes list of scaffold | scaffold5052.1 |
| Synonym | pfu_aug2.0_3617.1_25798 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5052.1_45100.t1 | 1 | 1 | SAM_2 | 351 | 407 | 8.8e-09 | 35.0 | 9.9e-12 | 3.7e-08 | 33.1 |
| pfu_aug1.0_5052.1_45100.t1 | 1 | 1 | SAM_1 | 352 | 407 | 1.9e-12 | 47.1 | 1.1e-15 | 3.9e-12 | 46.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5052.1_45100.t1 | gi|241259114|ref|XP_002404787.1| | harmonin-interacting ankyrin-repeat containing protein (harp), putative [Ixodes scapularis] | 5.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_5052.1_45100.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5052.1_45100.t1 atgaacgccgtgtcctttctcgtgaactatggatgcaatatttggtcgttggacaatgagtatcacacggctatggacat cgccgctttgggagggaaggaaaacatcgtaagcgccttggacggggaacatgcccgacagaaacgattaaatccgaaat cagctgagcaacagagtcaaagggcggtgaaattggctgatcagaatatcaaaagatacgagcaacgccaaagggaggcc gcgaggtatgcagagagggaacaacgacgaatccaagcagaaaccgatcctgactttaaacctccctctggtaaaaattt cttcaaaacgttgacgatgaggttcaaaaataataaagggacaaggagatattcaagtaatcaaaatggtgttacaagct tctccgaaatgacgcaacaatctacaaagagaggtataggaagaaagattctacaaaagaaagcgagtcaggacaccgct tctattaatgattttcgaatcagtgaaagagactctagtggaaatagaacattaaggtctgttggtggaggattcagaaa aaattctgatgttctgtatcttactaacagggaaaacgatgcgcaaagtggtgcgcgcaagcctttacagggattgtttc ctggtggcatgcaaagaaataaatcaaaaagtgaaaatgatttgttagattccggatttgaagataatagtaattcgtcc aacaataatgaagaagatgacgaggaaaataagccaggtctactttttcggcctggtatgggtcaaatatcctttcttaa aagtcatggcatggccgggacattgagctccatgacacgttcggcatcatacgacccactttcagcaccagatagcgcag tgaatcacggtcacactgacagtgttgacggtggggatccagctaacaagcgaaaaagtggtagctctgatagtataggg accaccacaagtcttgaggaacgcatgaaggagacactaccatggaacccggatgaagtatgctctgatgacgaagagga agacacagagacgtctgctttaattcggttcctggaggcatgtgacctcaaccactacacaagactgtttaatgagcagg agattgacctccaagcacttatgcttctctccgatgatgacatggagaaattaggactgaagataggtccgaggaaaaaa ctacaaattgccataaagaaaagacaagaggtgttggacaatccacttccgctgcgtgattctcatctatag |
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Protein
| Protein ID | pfu_aug1.0_5052.1_45100.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5052.1_45100.t1 MNAVSFLVNYGCNIWSLDNEYHTAMDIAALGGKENIVSALDGEHARQKRLNPKSAEQQSQRAVKLADQNIKRYEQRQREA ARYAEREQRRIQAETDPDFKPPSGKNFFKTLTMRFKNNKGTRRYSSNQNGVTSFSEMTQQSTKRGIGRKILQKKASQDTA SINDFRISERDSSGNRTLRSVGGGFRKNSDVLYLTNRENDAQSGARKPLQGLFPGGMQRNKSKSENDLLDSGFEDNSNSS NNNEEDDEENKPGLLFRPGMGQISFLKSHGMAGTLSSMTRSASYDPLSAPDSAVNHGHTDSVDGGDPANKRKSGSSDSIG TTTSLEERMKETLPWNPDEVCSDDEEEDTETSALIRFLEACDLNHYTRLFNEQEIDLQALMLLSDDDMEKLGLKIGPRKK LQIAIKKRQEVLDNPLPLRDSHL |
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