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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_501.1_50903
Locus scaffold501.1 : 45578 ... 54165 : -
To GenomeBrowser scaffold501.1:45578..54165
Genes list of scaffold scaffold501.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_501.1_50903.t2 1 1 7tm_1 38 410 3.9e-25 88.4 1.7e-28 6.1e-25 87.8

Transcript
Transcript IDpfu_aug1.0_501.1_50903.t1
Definition-
>pfu_aug1.0_501.1_50903.t1
atgatgccgatcacgtcatctgtgacattacagttctggaaccagtattattcacaccgtttcataccaatgtcaatatt
tctcgtgacgcttataatttttggaatattgggaaacgtcatagtagtgattgtgtacattttacgccctagacttcgca
cctatggtcgatattttatcccttacttcgctgttttggatttattgtccatcgtatttagtggtagtctaggcttaatt
aagtgtttcagatatgtaatctttcccggtgacgcaatctgcaaactattgacttattcaacgtatacatccgttttcgc
atcattattgttacttctgttcatttctgtccagaggtacgttaaaatttgccgtccttttggccgccagttttcgaagt
ttgaatgccgtttgtttttaatactttcaattattttgcctggagtctcgtttataccattaactgtagtaactggaaca
tttcatgttacaaacgaaaagcttgcacttatagaaacgcgatgtggtatcgtcccaaagtatgttgcaggaactacggc
ctatcgcaaaataggtgcaatgatacctctccttgaaatatgtataatgactgtcatttactacaaaatatggcgtcata
tgcctactcaaaaacaaacgagaacgaagaatgactccgatacagaaccgaaacgtaaaaatagaagcggaactgaactc
acaaggtgtgtcttatcgacatacgaccacgccagtgatagagttaaagataaggaagatcatagaatttctatggagaa
taatgaagtaaatgatggaaaaatttcgtcagaagatgttgttaaaggggaagtaaccatgtttcatagtcagatgagtc
aagcagcatgcttttctaagattaatgccaaacacgagagaaatgaaatgcaaatgattccaggagatgaaagagaagag
cacgaagctgtctcgaatgatgagacgcattttgaaaatcgaaatgtaaaaagatgttactatggcaggagtacattgag
ccgaactacaaccgttttcataattatctccgtactcggttttctatcatatatgccttcagcagttatcggcaccatgg
aaacagaaaactatttgttcttcgatcaactttcacagcaaatgtttgttacttgttcccttttaagggtattttaccta
ttcaaccatgcagccaatcctcttatttacgggatctttgataccaaattcaggaacgaaatgaagctttaa
Transcript IDpfu_aug1.0_501.1_50903.t2
Definition-
>pfu_aug1.0_501.1_50903.t2
atgatgccgatcacgtcatctgtgacattacagttctggaaccagtattattcacaccgtttcataccaatgtcaatatt
tctcgtgacgcttataatttttggaatattgggaaacgtcatagtagtgattgtgtacattttacgccctagacttcgca
cctatggtcgatattttatcccttacttcgctgttttggatttattgtccatcgtatttagtggtagtctaggcttaatt
aagtgtttcagatatgtaatctttcccggtgacgcaatctgcaaactattgacttattcaacgtatacatccgttttcgc
atcattattgttacttctgttcatttctgtccagaggtacgttaaaatttgccgtccttttggccgccagttttcgaagt
ttgaatgccgtttgtttttaatactttcaattattttgcctggagtctcgtttataccattaactgtagtaactggaaca
tttcatgttacaaacgaaaagcttgcacttatagaaacgcgatgtggtatcgtcccaaagtatgttgcaggaactacggc
ctatcgcaaaataggtgcaatgatacctctccttgaaatatgtataatgactgtcatttactacaaaatatggcgtcata
tgcctactcaaaaacaaacgagaacgaagaatgactccgatacagaaccgaaacgtaaaaatagaagcggaactgaactc
acaaggtgtgtcttatcgacatacgaccacgccagtgatagagttaaagataaggaagatcatagaatttctatggagaa
taatgaagtaaatgatggaaaaatttcgtcagaagatgttgttaaaggggaagtaaccatgtttcatagtcagatgagtc
aagcagcatgcttttctaagattaatgccaaacacgagagaaatgaaatgcaaatgattccaggagatgaaagagaagag
cacgaagctgtctcgaatgatgagacgcattttgaaaatcgaaatgtaaaaagatgttactatggcaggagtacattgag
ccgaactacaaccgttttcataattatctccgtactcggttttctatcatatatgccttcagcagttatcggcaccatgg
aaacagaaaactatttgttcttcgatcaactttcacagcaaatgtttgttacttgttcccttttaagggtattttaccta
ttcaaccatgcagccaatcctcttatttacgggatctttgataccaaattcaggaacgaaatgaagctttaa

Protein
Protein IDpfu_aug1.0_501.1_50903.t1
Definition-
>pfu_aug1.0_501.1_50903.t1
MMPITSSVTLQFWNQYYSHRFIPMSIFLVTLIIFGILGNVIVVIVYILRPRLRTYGRYFIPYFAVLDLLSIVFSGSLGLI
KCFRYVIFPGDAICKLLTYSTYTSVFASLLLLLFISVQRYVKICRPFGRQFSKFECRLFLILSIILPGVSFIPLTVVTGT
FHVTNEKLALIETRCGIVPKYVAGTTAYRKIGAMIPLLEICIMTVIYYKIWRHMPTQKQTRTKNDSDTEPKRKNRSGTEL
TRCVLSTYDHASDRVKDKEDHRISMENNEVNDGKISSEDVVKGEVTMFHSQMSQAACFSKINAKHERNEMQMIPGDEREE
HEAVSNDETHFENRNVKRCYYGRSTLSRTTTVFIIISVLGFLSYMPSAVIGTMETENYLFFDQLSQQMFVTCSLLRVFYL
FNHAANPLIYGIFDTKFRNEMKL
Protein IDpfu_aug1.0_501.1_50903.t2
Definition-
>pfu_aug1.0_501.1_50903.t2
MMPITSSVTLQFWNQYYSHRFIPMSIFLVTLIIFGILGNVIVVIVYILRPRLRTYGRYFIPYFAVLDLLSIVFSGSLGLI
KCFRYVIFPGDAICKLLTYSTYTSVFASLLLLLFISVQRYVKICRPFGRQFSKFECRLFLILSIILPGVSFIPLTVVTGT
FHVTNEKLALIETRCGIVPKYVAGTTAYRKIGAMIPLLEICIMTVIYYKIWRHMPTQKQTRTKNDSDTEPKRKNRSGTEL
TRCVLSTYDHASDRVKDKEDHRISMENNEVNDGKISSEDVVKGEVTMFHSQMSQAACFSKINAKHERNEMQMIPGDEREE
HEAVSNDETHFENRNVKRCYYGRSTLSRTTTVFIIISVLGFLSYMPSAVIGTMETENYLFFDQLSQQMFVTCSLLRVFYL
FNHAANPLIYGIFDTKFRNEMKL

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