Gene
| Gene Model ID | pfu_aug1.0_47807.1_41421 |
|---|---|
| Locus | scaffold47807.1 : 1 ... 4455 : + |
| To GenomeBrowser | scaffold47807.1:1..4455 |
| Genes list of scaffold | scaffold47807.1 |
| Synonym | pfu_aug2.0_1490.1_01668 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_47807.1_41421.t1 | 2 | 1 | Filament | 7 | 97 | 9.6e-06 | 25.2 | 1.9e-08 | 9.6e-06 | 25.2 |
| pfu_aug1.0_47807.1_41421.t1 | 2 | 2 | Filament | 95 | 164 | 9.6e-06 | 25.2 | 0.06 | 31.0 | 3.9 |
| pfu_aug1.0_47807.1_41421.t1 | 1 | 1 | FYVE | 162 | 201 | 9.5e-11 | 41.4 | 3.7e-13 | 1.9e-10 | 40.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_47807.1_41421.t1 | gi|115638586|ref|XP_786840.2| | 7.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_47807.1_41421.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_47807.1_41421.t1 attcgcaatgccatgaacactcagatggttcaactagacaaagaccttgctgatttcaaagaaaaggcacaaaaatatga aacagaaaatacttcactgacaacggagattgagtctctgaaaaccaaatatggagagactaaggcagctcatgactctt acgagaaagacatcgaaaacctgacggctgcgttggagacagaaaaacaagaacgtaaacaggatgtatccagtttacag gaagccagagaactactgatacagcagaaactggacatacagaatcagttacagtctatagaggattctctcaaacagga acaagaaatgcatgaggatacaaagaagaattcagccaatctacagcagatgctgagagaggaaaactctgctttacaaa caaaactgagtggaatagaatcagaaaaggatacattacagcgaggtatagatgaggagaaggcaaagaatgagcttcag atcacgcatcactgcagaaactgtggaaatatcttttgtaatgaatgctcgtcaagagatgctaaaatagcagcctctaa aaaagccgtgcgtgtctgtgataattgttatattgaaattagcaagagatga |
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Protein
| Protein ID | pfu_aug1.0_47807.1_41421.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_47807.1_41421.t1 IRNAMNTQMVQLDKDLADFKEKAQKYETENTSLTTEIESLKTKYGETKAAHDSYEKDIENLTAALETEKQERKQDVSSLQ EARELLIQQKLDIQNQLQSIEDSLKQEQEMHEDTKKNSANLQQMLREENSALQTKLSGIESEKDTLQRGIDEEKAKNELQ ITHHCRNCGNIFCNECSSRDAKIAASKKAVRVCDNCYIEISKR |
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