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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4644.1_16457
Locus scaffold4644.1 : 2777 ... 18945 : -
To GenomeBrowser scaffold4644.1:2777..18945
Genes list of scaffold scaffold4644.1
Synonym pfu_aug2.0_1462.1_08387

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4644.1_16457.t1 1 1 MFS_1 3 154 5.5e-08 31.9 3.3e-11 1.6e-07 30.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4644.1_16457.t1 gi|332028469|gb|EGI68512.1| 6.0e-13

Transcript
Transcript IDpfu_aug1.0_4644.1_16457.t1
Definition-
>pfu_aug1.0_4644.1_16457.t1
atgacggcgttcagtttcggactttatatgatgaatgtacatttcacgagcttggttttgcagcaaggctcaacaaaaac
aacagctgcctattacctttcaatatctggtgcatgtaatgctgcagccagacttttagttggagcagcatctaattcta
acaacatgaacgaactcctactcttctcgggctgcttcagcattttaggaacggcagcattgtttataccattttatatc
aattatgtgtccggacagattgcatttgccgttattctaggaatgtactctggatgctgctatacattatcgaactcaat
cgtagtgaaacttgttggaatagaaaatcttgctttggcatacggaatggaattgttcgcaggtggaattggtggagtgc
ttggaccagttatatctggtatgctagtggacgctggtctttcatatgcccagtctttcatggtgggaggcgcaaatctc
gtgaaccgcgaaagatttgcgcctgtcgaaccagagtgtaaaagccatgaacgcaaaaaatacgatactcattccttata
g

Protein
Protein IDpfu_aug1.0_4644.1_16457.t1
Definition-
>pfu_aug1.0_4644.1_16457.t1
MTAFSFGLYMMNVHFTSLVLQQGSTKTTAAYYLSISGACNAAARLLVGAASNSNNMNELLLFSGCFSILGTAALFIPFYI
NYVSGQIAFAVILGMYSGCCYTLSNSIVVKLVGIENLALAYGMELFAGGIGGVLGPVISGMLVDAGLSYAQSFMVGGANL
VNRERFAPVEPECKSHERKKYDTHSL

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