Gene
| Gene Model ID | pfu_aug1.0_46039.1_05347 |
|---|---|
| Locus | scaffold46039.1 : 1 ... 4282 : + |
| To GenomeBrowser | scaffold46039.1:1..4282 |
| Genes list of scaffold | scaffold46039.1 |
| Synonym | pfu_aug2.0_1072.1_08152 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_46039.1_05347.t1 | 2 | 1 | Amidase | 2 | 72 | 3.7e-14 | 52.4 | 1.2e-08 | 0.00018 | 20.5 |
| pfu_aug1.0_46039.1_05347.t1 | 2 | 2 | Amidase | 78 | 124 | 3.7e-14 | 52.4 | 6.4e-12 | 9.5e-08 | 31.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_46039.1_05347.t1 | gi|260813975|ref|XP_002601691.1| | hypothetical protein BRAFLDRAFT_94571 [Branchiostoma floridae] | 3.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_46039.1_05347.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46039.1_05347.t1 gttgagagtgatgtgagtaaaaaggttgttggcatacttaaagaaggtttcaaagaagtggaagatggatatgctaaggt tgttaaagaggcagcacagagattcaaggaatgtggtattactgtgaaggaggtttccatgccgctacatgatgacggct tagccatatggacaccaataggatacgaaggtacatacaagacgatgattcaagggaatgtggtcttcaagaagtcattc tcaatgatgaaaaatacagctccatttgacgtcaccggtcatccagccataacaattaatgccggcttttgtgacggttt accatgcggaatgatgatcgtaggacgcatgttcgatgacctcgctgttctccaggtcgccagagcgtttgaaaagcttc caaaggaaaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_46039.1_05347.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46039.1_05347.t1 VESDVSKKVVGILKEGFKEVEDGYAKVVKEAAQRFKECGITVKEVSMPLHDDGLAIWTPIGYEGTYKTMIQGNVVFKKSF SMMKNTAPFDVTGHPAITINAGFCDGLPCGMMIVGRMFDDLAVLQVARAFEKLPKEK |
|