Gene
| Gene Model ID | pfu_aug1.0_45598.1_41360 |
|---|---|
| Locus | scaffold45598.1 : 1005 ... 4478 : + |
| To GenomeBrowser | scaffold45598.1:1005..4478 |
| Genes list of scaffold | scaffold45598.1 |
| Synonym | pfu_aug2.0_1763.1_11847 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_45598.1_41360.t1 | 1 | 1 | RVT_1 | 621 | 700 | 5.2e-15 | 55.3 | 4.0e-18 | 9.8e-15 | 54.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_45598.1_41360.t1 | gi|291225955|ref|XP_002732962.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_45598.1_41360.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_45598.1_41360.t1 atggcagatgaactttccaaggaagaacttgaagccattgccgccgctttcaaggaaatgaaagtgaagcccaaagctga cagcgcctccaacttaaagaaatggatggtggactatgtagcccaaataaaggatgctgatcagacaactactcaaccta cagctacagttaaacaagagccaagcagtgatgccacatcaacatccaagatactaagtcaacatattcctaagctatcc tgcttctctggagaccaaagtaagcaagacacatcctatgatttatggaggtatgaagtagactgccttgtcagagagaa gtattcagagagcagcattgcccaagctatccgtagatcactacgcggagatgccggtaaggtcgccatgcgtctcggaa cggaagcaaaggttgccgacattttagacaagatggaaagtgtgtttgggaccatggagagaggcgaaaagattttagaa gaattttatagtaccaaacagagaaaagatgaagacagtatggcatggtgttgtagactggaggaaatattccgcaaagc cgttgtcaacggagtaatgagtaggagtgaggccaatgacaaattcagatccagatattggaatggtctacaccaatgga tacaggatgtaagtcgatacaagtatgaccgccttacagaatttgatgacctgcgaaaagaagttagacttatcgagaag gagcatattaccaagaaagatcaagccaacattgtcatccctgcttccactgaacagccctctgaactacaggagcttaa aggaatgatccaacagctaactgccaaggtcacacacccggagaaagacaaagacaaacacagaggaccacaaacaacat acagaggtggatatggtggtactggtagacaacaacaacaaagaggcagacaaggacaacaacaatgatcactgacgcaa gccgacgtcaaacttcagcagacctgcgtcgcggggcagacgttaggtcacctcagaagtcaacgccctacatcatctta caaacagaatacatccttggctgggaatgcatccgaagtcaaaattttcattgatggcatagaggtcacttcacttttag ataccggatctactgtttcaagcgtcagtgaagcattccatcagcagcatctaccaaatcttcctcttgatgagattatt catatagagtgtgctgatggtggaacactaccatatttaggatacattgaagccactattacttcacctggacttcctca tgcttcagacactaccatgcattaccccatcctagttgtaccagacagcaattataataaggatgtaccagtattactag ggaccaatatcttacgtcacctactatcagaagttcataccaactatggagatcagtacctacagacagcaaacctacac actccctggtacctgacattacgcagcatgacacttagagacaaagaacttaagcgcaaacagaacagactagggattgt aaaatctgcagagactcatcctatcatgataccaccaaattctagtatcacagtctcaggctatatagacaagtcattac catatgagcctacaccagctttacttcagcctacacctcagtcagttataccatcagatcttgacatagagcctaccatt atcaactataccaatccagttaacaacttagtccaagttcacatagataatgtcaccactctcacagtacagataccacc cagagctatatcatgcgaggtacaaccagtgactatggaagacgtcaacatctgtaaaggagcccaagtcaccgataact tacttgaccttgtacagatagnaggcttttataagtataccaggatgccatttgggcttgtcaacgctcccgccacatac caacgccttatggaacagtgctttgaaggattacgtctggacatatgttacatctacctagacgatctgatcatttatgc gaagacattcgaagaacatcttgaaagagtagagaaaattttccaacgcttacgagaagtcaacctgaagctctccccta agaagtgtgaattctttaagggaaaagaaagaaaaagactagaaaagaggcgaagccaaaacctccgccagctaattgga aatggagctctgaacaggaaacaacattcaacaaccctgaaagagaaacttactacttacccgatccttgggtatgcaga ctacaccttaccttttgaactgcatacagatgtttcatccagtagtcttggagctgtgctgtatcagacccagaacgatg aaaaccgagtgatcgcatatgccagcaggagtctgtccaaaagtgaaaagaattacccggcacacaagagagaattcctt gcactgaagtgggccgtttgcgaaaaatttcaagattacctttatggaaacaccatcactgcgattactgacaacaatcc tcttacctatgccatgacaacaacaaaactagatgcaacaggtcagagatgggtcgccgcactcaccaactacacttttg acattagatacagacctggatcacagaatattgatgcagacagtttatcccggattccgcagcacatttcttcagatccc atcaaagccttatgtaatgctactcgccagattccttacgttgagaccctagcagtcacatccgatccagtcgataacat acaacacttacctgatttttcggaaattgacatcagacaacgccagcgagaagaccccgtcactagatattggatcccat tcgtcacttga |
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Protein
| Protein ID | pfu_aug1.0_45598.1_41360.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_45598.1_41360.t1 MADELSKEELEAIAAAFKEMKVKPKADSASNLKKWMVDYVAQIKDADQTTTQPTATVKQEPSSDATSTSKILSQHIPKLS CFSGDQSKQDTSYDLWRYEVDCLVREKYSESSIAQAIRRSLRGDAGKVAMRLGTEAKVADILDKMESVFGTMERGEKILE EFYSTKQRKDEDSMAWCCRLEEIFRKAVVNGVMSRSEANDKFRSRYWNGLHQWIQDVSRYKYDRLTEFDDLRKEVRLIEK EHITKKDQANIVIPASTEQPSELQELKGMIQQLTAKVTHPEKDKDKHRGPQTTYRGGYGGTGRQQQQRGRQGQQQXSLTQ ADVKLQQTCVAGQTLGHLRSQRPTSSYKQNTSLAGNASEVKIFIDGIEVTSLLDTGSTVSSVSEAFHQQHLPNLPLDEII HIECADGGTLPYLGYIEATITSPGLPHASDTTMHYPILVVPDSNYNKDVPVLLGTNILRHLLSEVHTNYGDQYLQTANLH TPWYLTLRSMTLRDKELKRKQNRLGIVKSAETHPIMIPPNSSITVSGYIDKSLPYEPTPALLQPTPQSVIPSDLDIEPTI INYTNPVNNLVQVHIDNVTTLTVQIPPRAISCEVQPVTMEDVNICKGAQVTDNLLDLVQIXGFYKYTRMPFGLVNAPATY QRLMEQCFEGLRLDICYIYLDDLIIYAKTFEEHLERVEKIFQRLREVNLKLSPKKCEFFKGKERKRLEKRRSQNLRQLIG NGALNRKQHSTTLKEKLTTYPILGYADYTLPFELHTDVSSSSLGAVLYQTQNDENRVIAYASRSLSKSEKNYPAHKREFL ALKWAVCEKFQDYLYGNTITAITDNNPLTYAMTTTKLDATGQRWVAALTNYTFDIRYRPGSQNIDADSLSRIPQHISSDP IKALCNATRQIPYVETLAVTSDPVDNIQHLPDFSEIDIRQRQREDPVTRYWIPFVT |
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