Gene
| Gene Model ID | pfu_aug1.0_4543.1_01761 |
|---|---|
| Locus | scaffold4543.1 : 58965 ... 83905 : - |
| To GenomeBrowser | scaffold4543.1:58965..83905 |
| Genes list of scaffold | scaffold4543.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4543.1_01761.t1 | 2 | 1 | p450 | 79 | 116 | 5.0e-38 | 130.7 | 1.3e-05 | 0.2 | 10.1 |
| pfu_aug1.0_4543.1_01761.t1 | 2 | 2 | p450 | 116 | 231 | 5.0e-38 | 130.7 | 6.2e-39 | 9.2e-35 | 120.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4543.1_01761.t1 | gi|196004903|ref|XP_002112318.1| | hypothetical protein TRIADDRAFT_13664 [Trichoplax adhaerens] | 1.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_4543.1_01761.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4543.1_01761.t1 atgcaaaaacacaaaagacgagtacagcacgagacggaaaagagacacacgacatgtatggtaaaattagaatcttcatt tccagccttctttaaattttctatcaaccaaacttatgtggatgatgcatctggaaatactttgtgcaatgtatgtacag atgctggtcatgtgacaatggtgccgtcgaggcatttgaggcatcatttttctgtatttgagcggctcggtattccgggg cctaaacctttcttattcttcggcaatctcccagaaattttgaaaaagggtcaactgcaagcaataattgattgggaaaa gcaatacggacgtatttttgggatcgtcacaaggaaagcaaaagaaacaaaaacatatggcgatattacaattcctgctg gaatgaatatacaggccaatgtttgggcgctccaccacgatagtgatttctggacacagccgaatgaattcataccggaa agatttgctcccgaaaacaaagataaaataattccctatagttttcttccattcggagctgggccccgaaactgcattgg atctcgatttgctttgatagaaacgaaatgtgcaattgctagagtactacaaaaatacagatttgaagccgtttcacaaa ctaagaaagatctggccttggaatgtagaggcgccattattccacgcgacggcgtccatgttaaagtgaaagcgaggcca ttccgtgaagaatga |
|
Protein
| Protein ID | pfu_aug1.0_4543.1_01761.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4543.1_01761.t1 MQKHKRRVQHETEKRHTTCMVKLESSFPAFFKFSINQTYVDDASGNTLCNVCTDAGHVTMVPSRHLRHHFSVFERLGIPG PKPFLFFGNLPEILKKGQLQAIIDWEKQYGRIFGIVTRKAKETKTYGDITIPAGMNIQANVWALHHDSDFWTQPNEFIPE RFAPENKDKIIPYSFLPFGAGPRNCIGSRFALIETKCAIARVLQKYRFEAVSQTKKDLALECRGAIIPRDGVHVKVKARP FREE |
|