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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_45066.1_55947
Locus scaffold45066.1 : 387 ... 4657 : +
To GenomeBrowser scaffold45066.1:387..4657
Genes list of scaffold scaffold45066.1
Synonym pfu_aug2.0_380.1_00676

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_45066.1_55947.t1 1 1 Peptidase_M17 1 167 0.0 177.4 0.0 0.0 177.2

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
trochophore 1
>Adult tissues
maleGonad 2

Transcript
Transcript IDpfu_aug1.0_45066.1_55947.t1
Definition-
>pfu_aug1.0_45066.1_55947.t1
atgtgtggaatgaagagggattgtggtggtgccgctggcatactcggggcattctatgctgctgtcaaatgtggattcac
agagaatctccatgcagtgttctgtctggcagagaacgcagtaggtcccctggcatgtagacctgatgatgtatttacca
tgtattctggaaaaactgttgaagtgaacaacacggacgccgaaggtcgtttagtgttaggtgatggggtggcgtatgca
cgtaaggatcttaaggctgatgttgtgatagatatggctacgttaacaggagctcagggaatagctacgggtaaatatca
tgggagtatagtaacaaacactgaggagatggagtcgtggtgcgttaaagctggcaagaattctgccgatctcgtccatc
cgatgccttactcaccagaacttcattacagtgaattctccagcactattgccgacatgaaaaactctgttgctgtaggt
attacacagacttgctgcatattaaaattctactctatctttttgatagaaatattaaatacaaatctttga

Protein
Protein IDpfu_aug1.0_45066.1_55947.t1
Definition-
>pfu_aug1.0_45066.1_55947.t1
MCGMKRDCGGAAGILGAFYAAVKCGFTENLHAVFCLAENAVGPLACRPDDVFTMYSGKTVEVNNTDAEGRLVLGDGVAYA
RKDLKADVVIDMATLTGAQGIATGKYHGSIVTNTEEMESWCVKAGKNSADLVHPMPYSPELHYSEFSSTIADMKNSVAVG
ITQTCCILKFYSIFLIEILNTNL

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