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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_44645.1_48566
Locus scaffold44645.1 : 1 ... 4035 : -
To GenomeBrowser scaffold44645.1:1..4035
Genes list of scaffold scaffold44645.1
Synonym pfu_aug2.0_2844.1_15644

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_44645.1_48566.t1 1 1 PP2C 2 162 1.7e-35 122.6 2.6e-39 1.9e-35 122.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_44645.1_48566.t1 gi|195480388|ref|XP_002101244.1| GE17512 [Drosophila yakuba] 8.99634e-43

Transcript
Transcript IDpfu_aug1.0_44645.1_48566.t1
Definition-
>pfu_aug1.0_44645.1_48566.t1
atggtagataatactgaactatatgttgcaaatactggtgactgtcgagcaattcttggagtccagggattggatgaaga
atggcatcatgttgaactttcacatgttcacgatctccaaaatcctcaggaagtgagaagaatcttgcagtcacatccta
atgaatcaacaaatatcatcaagcaagggagactatttggggaactagctccatcacgtgcctttggtgatgcccgttac
aagtggacgctgtctgagatgaaatgtttcaaggactatctttcacaaccaaatgccgaattagggatcaatcctgaaag
agtaatgccaaataactacatcactccgccttatctaactgctgaacctgaagtaatgaagcacacactgactccaaatg
ataagtttttagttatcgccactgatggattgtgggatatgttgtctccggagcaggtggtcaaattagtagctggacac
atgcttggccaacaagttatgatacctgaggacctgaattatggaaacatgggcacgcttaaagagataaataagtatct
aaaacaacgcaaggttgggtttagtaatcgcacagtagacgacaatgcagcca

Protein
Protein IDpfu_aug1.0_44645.1_48566.t1
Definition-
>pfu_aug1.0_44645.1_48566.t1
MVDNTELYVANTGDCRAILGVQGLDEEWHHVELSHVHDLQNPQEVRRILQSHPNESTNIIKQGRLFGELAPSRAFGDARY
KWTLSEMKCFKDYLSQPNAELGINPERVMPNNYITPPYLTAEPEVMKHTLTPNDKFLVIATDGLWDMLSPEQVVKLVAGH
MLGQQVMIPEDLNYGNMGTLKEINKYLKQRKVGFSNRTVDDNAA

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