Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_42415.1_27007
Locus scaffold42415.1 : 1 ... 4894 : +
To GenomeBrowser scaffold42415.1:1..4894
Genes list of scaffold scaffold42415.1
Synonym pfu_aug2.0_481.1_04240

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_42415.1_27007.t1 gi|260793344|ref|XP_002591672.1| hypothetical protein BRAFLDRAFT_80761 [Branchiostoma floridae] 5.0e-17

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_42415.1_27007.t1
Definition-
>pfu_aug1.0_42415.1_27007.t1
atggaggtaaaattgatgtatggaatgttgagtctggagaaaatgtacagagcctcagagcatttgatgactgtgtaaca
ggattacaggtgagcaataagttagtctacgcaagcagcagtgaaggaaccataaaggtttttgagacaagagagtcgga
attagtctgtatttttgagtcagagaatattcaggctgaaagaggtggaatcttgacggagcgacatatccgaggatttt
atgcgaatgatgaactgatttattatggggatgatggcattaatatcaaagtattaaactggaagacaggtatttttctt
tag

Protein
Protein IDpfu_aug1.0_42415.1_27007.t1
Definition-
>pfu_aug1.0_42415.1_27007.t1
GGKIDVWNVESGENVQSLRAFDDCVTGLQVSNKLVYASSSEGTIKVFETRESELVCIFESENIQAERGGILTERHIRGFY
ANDELIYYGDDGINIKVLNWKTGIFL

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