Gene
| Gene Model ID | pfu_aug1.0_4195.1_44891 |
|---|---|
| Locus | scaffold4195.1 : 61592 ... 80615 : - |
| To GenomeBrowser | scaffold4195.1:61592..80615 |
| Genes list of scaffold | scaffold4195.1 |
| Synonym | pfu_aug2.0_235.1_17160 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4195.1_44891.t1 | 4 | 1 | zf-B_box | 22 | 59 | 2.8e-12 | 46.2 | 8.0e-10 | 3.0e-06 | 27.0 |
| pfu_aug1.0_4195.1_44891.t1 | 3 | 1 | PHD | 24 | 49 | 2.4e-08 | 33.5 | 0.015 | 54.0 | 3.5 |
| pfu_aug1.0_4195.1_44891.t1 | 4 | 2 | zf-B_box | 79 | 116 | 2.8e-12 | 46.2 | 5.9e-12 | 2.2e-08 | 33.8 |
| pfu_aug1.0_4195.1_44891.t1 | 3 | 2 | PHD | 82 | 111 | 2.4e-08 | 33.5 | 0.22 | 820.0 | -0.2 |
| pfu_aug1.0_4195.1_44891.t1 | 3 | 3 | PHD | 481 | 525 | 2.4e-08 | 33.5 | 6.4e-12 | 2.4e-08 | 33.5 |
| pfu_aug1.0_4195.1_44891.t1 | 4 | 3 | zf-B_box | 517 | 527 | 2.8e-12 | 46.2 | 0.17 | 640.0 | 0.3 |
| pfu_aug1.0_4195.1_44891.t1 | 1 | 1 | Bromodomain | 561 | 643 | 1.6e-20 | 72.7 | 1.4e-23 | 5.3e-20 | 71.1 |
| pfu_aug1.0_4195.1_44891.t1 | 4 | 4 | zf-B_box | 561 | 575 | 2.8e-12 | 46.2 | 0.1 | 380.0 | 1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4195.1_44891.t1 | gi|189236075|ref|XP_972162.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4195.1_44891.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4195.1_44891.t1 atgaccttgacctactttttccgctttgtgattttgcctttaaaggccaatattgagcaaagttgtgatgacagccagga ggccacttcattctgtactgactgtaaggaatggctctgtgatcagtgtgtagctgctcataaacgagtcaaactcacaa aggatcatacaatacaaactaaggaagaagcacagaactctgtggaaagaaatgaggagcctactccagagaaactggct cactgcaccatacataaaaatgaggagttaaagttattctgtgagacgtgtgacaagttaacatgtcgggactgtcagct tctggagcacaaggatcataagtatcagttcttaacagaggctattgtacaacaacgtgagcaattacagatggcagtgc ttaaactgaaacagaaacgccaaaattatcaacaggcagataaaatactggcctccaaaaacctggagctccgaacaaaa ttaaacgatgtatgtgaaagtgtaagggaggtttgtagtgcggtctgcaaggaaatcaacagtcatgcggatacgctggt caattacctagaaaaatatatcaacaagaagactacagttataatggataagaaaactaatgtagaggaagctttaagta agatgaagcatgctatagacttcgtagaaaatgcattgaccgtgggtgatgattcctccatactgtacactagaggagtc atgatgaagacgctcaagttactttctacagctggcattgcatttgacccaagtattctgaattattcaatcacttatga gaatgaaaaggacttcttattgaagaatgtgtataaggcaggatcgctgctaattgatgggtccaaattctcaggtggag caacgccctcacaacaacccacgccacagggtatagctcatcagattcctacgcaacctgtccgcggtcagtctgtgcca gctgctcgccaaaaccagcctccaaatcgccaacagtggcagtccaatcagatttccaaccagatggagaaatggaaaca tcttcccattgagcaacaaaaccagcttaggaagaaaatgtacgaaaagttcatgcagcaacaacgtgaatctcaaatgc aagggtcaatgggtagtcatggtaatgcacctccctcctataacaactctataggaccagggggtaatccagtcaactcg tcactccaaaatctgagcaatttgatcaacaacacaccaaactcagggatctctacctcaatgccatacaatcgccatgg atacccgccacagagtaccgctagaaacagctcggtacatgcatcagggacatattacccaccaggacataatatgtaca atacaatgccacacccaggacacccaggacaccaagcagggaaggtgatgccgtccagtaatgatgatcctaatgaagat tactgtgctgtatgccagaatggtggagatctcctgtgttgtgaatcctgtcctaaagtcttccatctcaaatgtcacat tccagaactcaaggaattcccaataggagaatggcgatgttctttatgtgagaaggaggaggaagtaactctcacagaac cagagaagaaggattacggaattataggtcctggcaaacggaaagccccttcagggctaacaaacaaggaaatcaaagta tgtgagaggatactcttagagctatactgtaacaaagacagtacaatattccatgaacctgtcagtaaagcggtaccaaa ctactataagattatcacaaagcccatagatttctccaagatcaaatctaagctacagcgccatcattttaaccattata atagtatagaggatttcatgtcagactgtaaactggtgttcagaaactgctttacatataacggggcagggacacctatt tatagacaaggtcagctagtagaaggagagtatgagagactaatacgcaagtacctaccgtgttacgtggaatatttaca ggacttggagagaaaaacagagaccccactcagtgattcctccgagggcagcaatccagaaaaacgtatgaagaaaaaga gatacgaggaagatcctgacgtagatccaagtcgactagactcttacagctga |
|
Protein
| Protein ID | pfu_aug1.0_4195.1_44891.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4195.1_44891.t1 MTLTYFFRFVILPLKANIEQSCDDSQEATSFCTDCKEWLCDQCVAAHKRVKLTKDHTIQTKEEAQNSVERNEEPTPEKLA HCTIHKNEELKLFCETCDKLTCRDCQLLEHKDHKYQFLTEAIVQQREQLQMAVLKLKQKRQNYQQADKILASKNLELRTK LNDVCESVREVCSAVCKEINSHADTLVNYLEKYINKKTTVIMDKKTNVEEALSKMKHAIDFVENALTVGDDSSILYTRGV MMKTLKLLSTAGIAFDPSILNYSITYENEKDFLLKNVYKAGSLLIDGSKFSGGATPSQQPTPQGIAHQIPTQPVRGQSVP AARQNQPPNRQQWQSNQISNQMEKWKHLPIEQQNQLRKKMYEKFMQQQRESQMQGSMGSHGNAPPSYNNSIGPGGNPVNS SLQNLSNLINNTPNSGISTSMPYNRHGYPPQSTARNSSVHASGTYYPPGHNMYNTMPHPGHPGHQAGKVMPSSNDDPNED YCAVCQNGGDLLCCESCPKVFHLKCHIPELKEFPIGEWRCSLCEKEEEVTLTEPEKKDYGIIGPGKRKAPSGLTNKEIKV CERILLELYCNKDSTIFHEPVSKAVPNYYKIITKPIDFSKIKSKLQRHHFNHYNSIEDFMSDCKLVFRNCFTYNGAGTPI YRQGQLVEGEYERLIRKYLPCYVEYLQDLERKTETPLSDSSEGSNPEKRMKKKRYEEDPDVDPSRLDSYS |
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