Gene
Gene Model ID | pfu_aug1.0_4146.1_08818 |
---|---|
Locus | scaffold4146.1 : 1 ... 17124 : + |
To GenomeBrowser | scaffold4146.1:1..17124 |
Genes list of scaffold | scaffold4146.1 |
Synonym | pfu_aug2.0_3894.1_15880 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4146.1_08818.t1 | 4 | 1 | Treslin_N | 143 | 185 | 7.6e-17 | 60.4 | 0.012 | 180.0 | -0.3 |
pfu_aug1.0_4146.1_08818.t1 | 4 | 2 | Treslin_N | 346 | 438 | 7.6e-17 | 60.4 | 3.5e-13 | 5.3e-09 | 34.5 |
pfu_aug1.0_4146.1_08818.t1 | 4 | 3 | Treslin_N | 437 | 522 | 7.6e-17 | 60.4 | 4.7e-07 | 0.0069 | 14.3 |
pfu_aug1.0_4146.1_08818.t1 | 4 | 4 | Treslin_N | 513 | 585 | 7.6e-17 | 60.4 | 6.1e-09 | 9.1e-05 | 20.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4146.1_08818.t1 | gi|348535926|ref|XP_003455448.1| | 1.0e-15 |
Transcript
Transcript ID | pfu_aug1.0_4146.1_08818.t1 |
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Definition | - |
>pfu_aug1.0_4146.1_08818.t1 ttcaaagtcattcagcttaaaatgtgaacaacacaggtttaaggaattcaagcatcgtttcttcgaagattttgagaatg aaattcttgaaaattcaagaaaaaaagaacaaagtaataaaagtagaaagaatcattgtgactacttaagctgtgcaatc aaagaattactagcagactttcaatgggacactccagatattttttcacctgtgaagcaacctaaaagaaagagaaagaa ccaacacatgcatgattctataccaactgatgatggaggaaattttgttttccttttttcaaaatgtccatcgacatctg aagatatgcgacattttgctggaaaaaagattttagatgaagatgtcttggttgatgctctatttggtcaggctttactt aactccattcacatccatggtattaagttgcactggattgatgatctgtcatattctgaggatctgaatgtgacttgttt ggagatactgaataaagcactacaacaaacaaaaggatgtatcataccacaaagtacaatatgccagttacacaagccat ttatgtcaaatacctacctctcaaatatgtgtgttacaagccaattggcacacaaggaagaggcgacacagacagacaat caaaaacaacaaaaggaagtgtgtagtcttctaccatattcatccattatagaatggtatacaaggactcaaagaacata cttgaacagtgatggattggagaagagaggcttaagaatgctttgtaatgatggtacagacttgtgcaccttggaactca cagatacaaagaatcaagaatcccaaatctatcccaatgctacagctggtgataaatctttacttgaactcatgacatca gctgggggacagacaaatgaaggaagtttatataaggagttgtctatcagagcttctcagctagagttcctgtcagcaga agaagttgggtttttgcaagatttacaaagaagttatagacatgaaaatcatccaatcaaagctgtagctagtacaccta tatgtacacaagattttagagatgagacggaattgactaagtatttacagaaggagtatgagaagatatttgacattgat ggcagcatcttcatctgtgctcaaaccatagtcaccatagcattacacttcatgaagggaaaacatacagagaaccctca agagatatgtaacaactatttaagggaacattttgtcattcaaccagctgtattgagagaaaagtatctacagtcatcta gtgcagatcaaaaacagatcaaaattagagactacatgcacactttgccacagacgcttggtaatatttatgatgaactg atgcagcctcttcctgatgtattagaatcaatcctatctcctgacaaaagtggtagtgagtcagtgttcagtcgttcctt actcagctgtgaaccagataataatctcgatacatcactagacgtcatctcggcatcacagcccgtcaaatctgatgtac tgttggacagaaccaaaaggaactcaaggatggtcaagcataagagtgaaagtaaccttcaaggtcaagatttcaaatcg ccaccatttaaatcaccaagtaggaggaagaagatcatagcagagactccctctcataaacagaaagcaaggcatgtatg gaaacaacaggagaaggagagacgtaggtcccacactgtaactgatgtcaaagtagttactgagtcccctgttaaatcag atattataaaggacagtccctctcaacacaaaaaggccctgcatcttgtcaggcgttctttttactcagctggtcctatc aggagaacccgtagcctggctcattcactacagatagcagataagatatctggtaggaaacggcagctgtctgggaggct tagcagtattcttctccataactctcctgctgtctcaaaggtggaacttaaatctcctgataaaaactcatcatttcttc tgtctcaacttatgggtagtcctaccacaccaaattccaggaagactcccaaaaaggcgaggggaacaacaccagctaaa cttgtaggagaatctcccagtatgcacacgaggtccaaatctccagccgccttcagtgtgggaaagccaaaagctttatt tcaagatagtcctatgaagcaattcaaagaacctgaggaaaaatcccatagagcagtagggggttcagcaaagaaatcgc aggtttttggatttcctagtatatcatcccctcagacagtaacacctcgtaagacattggtaccagatctgcaatcaccc agtcagaatactaggtcaaaagtgtcaagtactcctactcgtcagtctgtcagggcagctctgttctgtaaaagtccaga actgaagcactcaaatcacaaaattgaaaaggggaatatagaatctccatcaagatcaaacaaacaaccatttaccaaga ggaagtctgctgttgtgtcagacgaagctattctcaaagaccaagacagtgagttctattcatttcagttgattgatccg tcggaagaaaaccatgcgctggtcagtgaacaggaaaatactcaggtttcctggctgaatgagaaaggtgaggagtgcag aatttccttcactgaagctcagaatcctccattagtaaaaggaaacacaccaaaaacaccatcttcaatgaaaggaaaga aaacaagaacacctacatcactagacaaatggccaaggataaaatcagtcagaaacagttctgaaaaatctaagtcaaat ttatcgaaatctttgttcagaaatgtggcagatgaatctagcattaatataaactcacaaaacaatgacatattttcaga attatctcaaaatcaaaattcatctcaattgtcacaagattctgtttgtagcatctcaaagaagagggggctacagctct ccccagagagtaacctcacaagtttttctcccagcaaacgtcaaaagtgcagcgattctggttatccttcaagcagtgat tcacgagcatcgatggtttgtgatcagagtaaagtaaacacaagactatcatactgtctgcattctagaatattgtccag gaagatgtcatccatagcgtccagtgagggtttctctacagtgaactcacagaatattggctctcagccgagtgtcggta ctttatcacagacaagccagcctagtattggttcattatcacaaacaagctggaggtcggaggattgtttctcggctact aatgatgaagtttttataaacaatagtcagtttgatcaaacaaataatagtcaaagtgatcaaatagataatgttcaagc tgatgaaaatgataaatttttcacagagaggagcgagtctcctatctttgcttccagtagaaagaggaagtacatagcct ctccggaaaacaatgttgcagaaaataacacagaagtcacaaatcctgctcaggatgatgtcattaacagtaccagtaag gtgtccccttccagcaggaagttttcaccaaatgtctctgctaaaagtttgatgcatcttatgaactccccattgctaaa atcgccacatgatcttggtcgtaaactgtccaatccgatcagtccagacaatttgaatatcaggagacgaagaattagtg gcaggtcatccagaaggtctttaaacctgcagaaatga |
Protein
Protein ID | pfu_aug1.0_4146.1_08818.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4146.1_08818.t1 SKSFSLKCEQHRFKEFKHRFFEDFENEILENSRKKEQSNKSRKNHCDYLSCAIKELLADFQWDTPDIFSPVKQPKRKRKN QHMHDSIPTDDGGNFVFLFSKCPSTSEDMRHFAGKKILDEDVLVDALFGQALLNSIHIHGIKLHWIDDLSYSEDLNVTCL EILNKALQQTKGCIIPQSTICQLHKPFMSNTYLSNMCVTSQLAHKEEATQTDNQKQQKEVCSLLPYSSIIEWYTRTQRTY LNSDGLEKRGLRMLCNDGTDLCTLELTDTKNQESQIYPNATAGDKSLLELMTSAGGQTNEGSLYKELSIRASQLEFLSAE EVGFLQDLQRSYRHENHPIKAVASTPICTQDFRDETELTKYLQKEYEKIFDIDGSIFICAQTIVTIALHFMKGKHTENPQ EICNNYLREHFVIQPAVLREKYLQSSSADQKQIKIRDYMHTLPQTLGNIYDELMQPLPDVLESILSPDKSGSESVFSRSL LSCEPDNNLDTSLDVISASQPVKSDVLLDRTKRNSRMVKHKSESNLQGQDFKSPPFKSPSRRKKIIAETPSHKQKARHVW KQQEKERRRSHTVTDVKVVTESPVKSDIIKDSPSQHKKALHLVRRSFYSAGPIRRTRSLAHSLQIADKISGRKRQLSGRL SSILLHNSPAVSKVELKSPDKNSSFLLSQLMGSPTTPNSRKTPKKARGTTPAKLVGESPSMHTRSKSPAAFSVGKPKALF QDSPMKQFKEPEEKSHRAVGGSAKKSQVFGFPSISSPQTVTPRKTLVPDLQSPSQNTRSKVSSTPTRQSVRAALFCKSPE LKHSNHKIEKGNIESPSRSNKQPFTKRKSAVVSDEAILKDQDSEFYSFQLIDPSEENHALVSEQENTQVSWLNEKGEECR ISFTEAQNPPLVKGNTPKTPSSMKGKKTRTPTSLDKWPRIKSVRNSSEKSKSNLSKSLFRNVADESSININSQNNDIFSE LSQNQNSSQLSQDSVCSISKKRGLQLSPESNLTSFSPSKRQKCSDSGYPSSSDSRASMVCDQSKVNTRLSYCLHSRILSR KMSSIASSEGFSTVNSQNIGSQPSVGTLSQTSQPSIGSLSQTSWRSEDCFSATNDEVFINNSQFDQTNNSQSDQIDNVQA DENDKFFTERSESPIFASSRKRKYIASPENNVAENNTEVTNPAQDDVINSTSKVSPSSRKFSPNVSAKSLMHLMNSPLLK SPHDLGRKLSNPISPDNLNIRRRRISGRSSRRSLNLQK |