Gene
| Gene Model ID | pfu_aug1.0_41160.1_55806 |
|---|---|
| Locus | scaffold41160.1 : 1 ... 5084 : - |
| To GenomeBrowser | scaffold41160.1:1..5084 |
| Genes list of scaffold | scaffold41160.1 |
| Synonym | pfu_aug2.0_2195.1_18725 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_41160.1_55806.t1 | 2 | 1 | Na_sulph_symp | 32 | 112 | 0.0 | 159.8 | 3.4e-12 | 1.7e-08 | 33.8 |
| pfu_aug1.0_41160.1_55806.t1 | 2 | 1 | CitMHS | 42 | 149 | 9.1e-12 | 44.2 | 2.9e-05 | 0.14 | 10.6 |
| pfu_aug1.0_41160.1_55806.t1 | 2 | 2 | Na_sulph_symp | 116 | 318 | 0.0 | 159.8 | 8.39994e-41 | 4.1e-37 | 128.1 |
| pfu_aug1.0_41160.1_55806.t1 | 2 | 2 | CitMHS | 195 | 307 | 9.1e-12 | 44.2 | 7.2e-13 | 3.6e-09 | 35.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_41160.1_55806.t1 | gi|115845615|ref|XP_790428.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_41160.1_55806.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41160.1_55806.t1 atggaagaaaaacctccaaaatatgtcgagatagatcaagatacattaaaagagaaagaaaagggtgaagaagaagggaa cggtatcagcgaaaatgacttccagagacttgggaaggctttatcacttgccattgcttactcctctaactgtggcggaa taggcagtatcacgggaacgaatcccaacgttatcatgaagggacaatcggacatattatatgaagatagaaatgctaca tcacctataacttttagctcatggatgcagttctgtgtgcccatatcagctatcgtaacactgatcgtatggatatggtt tcagatctactttcttagatgtcgattcgcagagggcgcagtgatggtacactttgtcttgttggcggttctttggatca ctagagacttaggaggtgtaggaggatggggcagaattttcccgccaaagactgttacagactctactccttccatactg atttcagccagtctattcctcttcccctcagctatcccaagggtattctgctgtagatcggaagaggaaaagaagtacgt tccactgttaccatggaaagtagcagagaagaccgtcccatggggagttatattactgcttggagggggatatgctctag ctaagggaagcgagaaatccggtttatcttcatggttaggagatgagctagctgttttcagtgactttgaaccctgggta atgaacatggtcctatgttttattgtggcggcggccacagaggtcaccagtaacactgcaatatgtacccttataatgcc cataatggcacaattggcattcaagctcaaggtgaatcctctttactatatgttccctaccgcaattgcaacgtcctttg catttatgttgcctgtagcaacgcctcctaatgcagttgtgttctcatacggttatgtcaaggtcatagacatg |
|
Protein
| Protein ID | pfu_aug1.0_41160.1_55806.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_41160.1_55806.t1 MEEKPPKYVEIDQDTLKEKEKGEEEGNGISENDFQRLGKALSLAIAYSSNCGGIGSITGTNPNVIMKGQSDILYEDRNAT SPITFSSWMQFCVPISAIVTLIVWIWFQIYFLRCRFAEGAVMVHFVLLAVLWITRDLGGVGGWGRIFPPKTVTDSTPSIL ISASLFLFPSAIPRVFCCRSEEEKKYVPLLPWKVAEKTVPWGVILLLGGGYALAKGSEKSGLSSWLGDELAVFSDFEPWV MNMVLCFIVAAATEVTSNTAICTLIMPIMAQLAFKLKVNPLYYMFPTAIATSFAFMLPVATPPNAVVFSYGYVKVIDM |
|