Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4042.1_08792
Locus scaffold4042.1 : 21864 ... 33231 : -
To GenomeBrowser scaffold4042.1:21864..33231
Genes list of scaffold scaffold4042.1
Synonym pfu_aug2.0_1017.1_24608

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4042.1_08792.t1 2 1 Cyclin_C 77 93 2.0e-23 82.5 0.69 3400.0 -2.1
pfu_aug1.0_4042.1_08792.t1 2 2 Cyclin_C 129 231 2.0e-23 82.5 4.1e-27 2.0e-23 82.5

Transcript
Transcript IDpfu_aug1.0_4042.1_08792.t1
Definition-
>pfu_aug1.0_4042.1_08792.t1
gtaaaaatgggggtagcattgcgtcatccacctattcatcaagatgaggtgtcagtacaaccacagtctgggatgaagcg
acagggagacagcatgttggatccgaatcagaagaggcggcctgcttttggagatattacaaatgccatcacagacaaaa
atgtgcagatgaagaaagacaaagatttgaaaaagtcacgacttcctaccaaaattttagaggtcacaaaagttgtcaac
aaaacagagaagaaaaagaaggaaaaaagtaccaaaaagaaagatcctgcatccgaaaataccattacattgtcacaaga
tgcaactgtagatgacgtggacagagagaatcgagcagatattgcccagtgtgctatttatgcaccattcattttcagat
attacaaggaaagagagtgtgccagagcatccatggagactcttactctatcacgttatatccttgagatgtcgttaatg
gagtacaaattcataaaatatagagagtccaaacaggctgctgcttgcctatacttagccatgaaaatgaaaaatgcagg
agactggtcagagaccctggagcattacacaggatacaaggcgtctgacttactgtcctttatgaaggagctgaattcca
tgctcatctcacctcctcgacagctcaacaccattcactccaaatactcccatgcactctggctgctttacatataa

Protein
Protein IDpfu_aug1.0_4042.1_08792.t1
Definition-
>pfu_aug1.0_4042.1_08792.t1
VKMGVALRHPPIHQDEVSVQPQSGMKRQGDSMLDPNQKRRPAFGDITNAITDKNVQMKKDKDLKKSRLPTKILEVTKVVN
KTEKKKKEKSTKKKDPASENTITLSQDATVDDVDRENRADIAQCAIYAPFIFRYYKERECARASMETLTLSRYILEMSLM
EYKFIKYRESKQAAACLYLAMKMKNAGDWSETLEHYTGYKASDLLSFMKELNSMLISPPRQLNTIHSKYSHALWLLYI

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495