Gene
| Gene Model ID | pfu_aug1.0_4042.1_08790 |
|---|---|
| Locus | scaffold4042.1 : 1 ... 6959 : + |
| To GenomeBrowser | scaffold4042.1:1..6959 |
| Genes list of scaffold | scaffold4042.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4042.1_08790.t1 | 1 | 1 | Ank_2 | 6 | 68 | 7.1e-16 | 58.3 | 2.7e-19 | 8.1e-16 | 58.1 |
| pfu_aug1.0_4042.1_08790.t1 | 2 | 1 | Ank_5 | 9 | 53 | 1.1e-16 | 60.4 | 3.3e-13 | 9.7e-10 | 38.3 |
| pfu_aug1.0_4042.1_08790.t1 | 1 | 1 | Ank_4 | 15 | 65 | 1.2e-13 | 51.1 | 5.8e-17 | 1.7e-13 | 50.6 |
| pfu_aug1.0_4042.1_08790.t1 | 2 | 1 | Ank | 15 | 43 | 2.2e-13 | 49.2 | 1.6e-11 | 4.8e-08 | 32.4 |
| pfu_aug1.0_4042.1_08790.t1 | 2 | 1 | Ank_3 | 15 | 39 | 6.4e-10 | 38.2 | 8.8e-09 | 2.6e-05 | 24.0 |
| pfu_aug1.0_4042.1_08790.t1 | 2 | 2 | Ank_5 | 37 | 86 | 1.1e-16 | 60.4 | 2.6e-09 | 7.8e-06 | 25.9 |
| pfu_aug1.0_4042.1_08790.t1 | 2 | 2 | Ank | 45 | 77 | 2.2e-13 | 49.2 | 6.2e-06 | 0.018 | 14.8 |
| pfu_aug1.0_4042.1_08790.t1 | 2 | 2 | Ank_3 | 45 | 67 | 6.4e-10 | 38.2 | 5.4e-05 | 0.16 | 12.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4042.1_08790.t1 | gi|340382320|ref|XP_003389668.1| | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_4042.1_08790.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4042.1_08790.t1 gcaggagctacagcaaatataaaaacaaggtcaggagacgtgtcacccctacatagagctgcttacaagggacatgtaga tataatgaaacttctactcaagtacaaagctgatccagaatgtcaagattctgatggtaaaactgccatgcacaaggcta cagaagaaggacaatgtgaagcagtaaagctacttatggatgtgtgcccaggatgtgcaaatataaaagattttaaagga aaagcacccttagactatataaaagatgataaatctaacatatttacaatattgaaatctactagtgattga |
|
Protein
| Protein ID | pfu_aug1.0_4042.1_08790.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4042.1_08790.t1 AGATANIKTRSGDVSPLHRAAYKGHVDIMKLLLKYKADPECQDSDGKTAMHKATEEGQCEAVKLLMDVCPGCANIKDFKG KAPLDYIKDDKSNIFTILKSTSD |
|