Gene
| Gene Model ID | pfu_aug1.0_3920.1_01573 |
|---|---|
| Locus | scaffold3920.1 : 1 ... 40501 : + |
| To GenomeBrowser | scaffold3920.1:1..40501 |
| Genes list of scaffold | scaffold3920.1 |
| Synonym | pfu_aug2.0_3.1_10023 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3920.1_01573.t1 | 2 | 1 | Ins145_P3_rec | 8 | 54 | 2.0e-09 | 36.8 | 4.2e-10 | 2.1e-06 | 26.9 |
| pfu_aug1.0_3920.1_01573.t1 | 2 | 2 | Ins145_P3_rec | 80 | 112 | 2.0e-09 | 36.8 | 0.00059 | 2.9 | 6.8 |
| pfu_aug1.0_3920.1_01573.t1 | 3 | 1 | RIH_assoc | 206 | 229 | 1.1e-14 | 53.9 | 0.033 | 160.0 | 1.9 |
| pfu_aug1.0_3920.1_01573.t1 | 3 | 2 | RIH_assoc | 801 | 826 | 1.1e-14 | 53.9 | 0.44 | 2200.0 | -1.8 |
| pfu_aug1.0_3920.1_01573.t1 | 3 | 3 | RIH_assoc | 1009 | 1080 | 1.1e-14 | 53.9 | 2.3e-18 | 1.1e-14 | 53.9 |
Transcript
| Transcript ID | pfu_aug1.0_3920.1_01573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3920.1_01573.t1 ttagctgcggatgccgagaatgcagacaatgccgcggagcaaaaacggcaaatgggtaaaagagtccgctatggggaaat agtccagttgaagcattcatttaccaataagtacattcacatgtgtacgtctcaaaccagtcaccaggataagaataata tgctgggtggaagtgttatccgattgtttcacaaagaactagaggcttacatggtggctgaaggcttgttcgatgacgag gttacagaggatggagatattttgcgttgggaacagcaagtgcgcctgcgccacatgacgacccggaagtacttgtgtat tgacgcatcaaaggaaatctcactcaccgacgacaacgaagatccacgtacagtgttcagactttactctgttctaagtg ttgcagcaagtggagagagtcagtacgacgatgcctttaccatacagtctgtagaaaagatacatgtggacgaatttaac tacgtcgctggaatggtcccttttctacttaatctcattaaagatagagaagaacgccactttttaaactcaaagaagac tcatactgtacttacagcgatggaggagctgcgaaaattcatggttgtcaaagacttaccgagcaagaacagacagaagt taatgaggaatctaagggtgatagatctactggtgaagattcttcagtgtacattagacggaacaaatgacgagatgaac ctgatccaagtcttcaaagaagcctatgagatactctacacatatatgataggcaaaagtcgcaaaaatgctttgtactt tgcaaagtatatagaattcttccaaacacagtttacccagaagcctgacagtgaggtctacgacaaggacaagcatgact ttctcatccatcaactggacctgtataaagctctctgttatggtcggaacgattattccatcaatatgataaccaaggag ctacgctatctgacatgggaagaaacgtttctggcgctaagatctgatatacttcctgacgccatcagagccaagtactg tgatcttactacaagtttgtttgtcgacgttggaaataactactcagtcctagatcatcctaacatctgctttgtttacg attacgtcggttccaaggacgaggaaaaaagccaaggggacttcgtcgtcaaagaacttgttgccatatttccggtgctt cgtgactggattgctgaattccttctggacaacaaatgcatgattgcttgtgacatcggccataacatgctcatagaaca ggttgtgcgcctgttgtatcacctagtaaagtttgggtactacttagacgctgaagatgtacaacagttgctggcaccat tactgacactacttgatggacgccatgacaatcccttcaagaaagataaagagaaaaattacacaaaggaggagaagaaa caaattcaccaataccaaacacatgaacgatttcaaaagtcaccagagacggaggccattgtcaacgctaagttccaagt acttgaagtcctggatctgttacttacatatcaaagaaattcaagattgcagagttttgtgaacaagttcaaagtatcgg aaatttgctacaaacaacggaaatctgggaatgtccttgtacccgtcttatcagaggagtttgacccccatagtcaaacc aaaaagtcattaaagattcagaaaaagattatcagagaactccgagatatgttcaacgtatcagcaatatttgacataga actgatgtctaaaatccttatggatttatcgtcatacaagtataacaagatgatcaccaagtcactaaatattctgaaca aagtttattcatcaaaaaccaacatgttcaacctctcatctaaagcccaggagagagccccagagttcttagacctactt ggaatggtagttaaagttgttggtaccgaactgacgttaaaacgaaaccaagcttacgtcatgaaatacatcatgcaaaa ttataaaaaggtcgcttatgtacttgacatgtcacgtgcggaaagggatctttgggactacctctccaacctttccatcg atatgaacagactaacagatagtgtgaaagaagatccagataaaatcgccattcatctgaaaacagcccctgagaaaagt atcagcatggcagacaaaagaatgtcggagaaggcaagactggaacttgatgaactaaacattaagtgtcttcaaatact gagagccatcatacacaacgaagaaagaaaaatgcctgaaacatgggcagtcaggacaacagaaccaaaaatcatgaaga gtatcaaactcataacccagatacagaattacatggacaaagaaggggccatgaaaaaaagtttaccgcacctatcaaca aggaatgaagacgttgctaaggaagttttaggcttcctttgcttgatgcttttcaacgcaaataccagtgttcagcaatc gatgttagattatttcttgtcaacgcgtgaggaagtcttctttatggcagtgagggatagaatggcattgtctacaaatt cgatcaaagaaaaacgttcattgcaagcacaactagatgctaagaagaaagaaacatccaaatcgttcgatagtcatttg aagaagtccttcccaatatcaatacaggccttgaagcaaatacaagcatacgaggatgcccttaggcaacagcgactctc cggatggtccagaaagaaggacaattcgaaaaatgataagaagtcttcgaaaaaaccaaagaagcccaaaccaccgaaag aaaagaaagtgaagaagcaacacaaagtaaaggactctgcaacgaatggcttgaagaaagaattgtcctttgcaaatcca ctgatgaaagaagaccagtcccttattgttcctgttgaacatgaaactgaaatggtcacgattaaagtggaggatccaga accggagccggttcaacaggagccggagaatccggaagaggatgaatccttggagtacagaaacgacggctacattgaac tagtactcaaagtcatggcaagaatgtgtgatgggcaaaatcaccatcttcaggactatctacgtgaacagcctgacaac gtaaagtccttcaacataataggagaagttacgaggttcctgaacgtcgtttatgctaatattacaggcaaaaatataga tctggtcatacaatgctttgaaactatgaacgaatttacagcggaagtgaaggacacactggacaagaaggccgtcatag ggttgatgacagagtgttatgagatgcatcaggttgacaagaaaaagatagaggaattaaagcatatagcagatccactg gacgtacccgatcctaaatccaaagtcaagtcactaaaagatgcaggaggaacactatttaaaggagttgttagaaagca gaaggacgagtttgctgacacttatatggacgtagggttccgtttgtacctggtgatggcccggatgtgtgacgtcgata ccaagctctttgatcgattcaagctacttccaatagagctgaaagcttacaacttctacaagaaaaactgcatgtccatc gaaatcgtcaaagatgatgaacttcagaaagtcaacttcagagtgaagaataagatcagtatcctctccgatgaccagta taacatggcgctatacattatgggaggactccataacttcttcacactcctggttgtggtcagctattttttaggaaatc atccgaggatgccaaacattcgcagcattatagcatcaatcaagatatcttcaatatatttggaaaaacgatctgtaaaa gtttccaaatgtattgaagatatcttgatgatcctaatgaatttgaagacgtttaaaatttgtatcacttggcgcgtgtc actgctggtggaccaggtggaccaggagttcccgaggacacatgtagcccagctcgatcaatttcggttggtcgtttctt caaacgcattcgaaaatttctgtttacaaaatgttctcaaatttatgaaacctgagtcctgtagcatcatatcccagtca tcttccatcgtctttcgacaagcttgtgcaagaaaaaagaaagatgacgaagtcgatgatgaaaagaagaaaccacatca atcaaaactcgatgccaagttctttagtttccaaacattctactatatgttgagcggtcggacaactccaagcaggagat atagtgacgtaggcttggccacgagtatgctcggacagagccgactggatctcttgcctccccctccttcctcattcaga gcacgccgcgacagacggtcctctatcagtagtagaagcggcagtcctgtaagagtcgagcagctccgacggaggagtcc ctctcgttattacgacgacccagatgacttcggacaaatgacgccagaccggtttgacgacagaccacgtagtccatcca gatcgaggcttggtagcgatgcagagatgcgagccataacccccagccctctatctaggagagacaccttatccgggctg agtccacgctggcccgacagtcacgcagctagtcctagggggaccgtcgtatttttctccgatgctgacccctttctacc accgccctcgttctcgcgcagaggaagtgtggaccgccgtggcagcgactatattccagaatcaatagagggtccgccgt acattccggaatttgatcttccagagcgggatcatgacactgatagtattaggagcggtgaatatagaggagaatccaga tattga |
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Protein
| Protein ID | pfu_aug1.0_3920.1_01573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3920.1_01573.t1 LAADAENADNAAEQKRQMGKRVRYGEIVQLKHSFTNKYIHMCTSQTSHQDKNNMLGGSVIRLFHKELEAYMVAEGLFDDE VTEDGDILRWEQQVRLRHMTTRKYLCIDASKEISLTDDNEDPRTVFRLYSVLSVAASGESQYDDAFTIQSVEKIHVDEFN YVAGMVPFLLNLIKDREERHFLNSKKTHTVLTAMEELRKFMVVKDLPSKNRQKLMRNLRVIDLLVKILQCTLDGTNDEMN LIQVFKEAYEILYTYMIGKSRKNALYFAKYIEFFQTQFTQKPDSEVYDKDKHDFLIHQLDLYKALCYGRNDYSINMITKE LRYLTWEETFLALRSDILPDAIRAKYCDLTTSLFVDVGNNYSVLDHPNICFVYDYVGSKDEEKSQGDFVVKELVAIFPVL RDWIAEFLLDNKCMIACDIGHNMLIEQVVRLLYHLVKFGYYLDAEDVQQLLAPLLTLLDGRHDNPFKKDKEKNYTKEEKK QIHQYQTHERFQKSPETEAIVNAKFQVLEVLDLLLTYQRNSRLQSFVNKFKVSEICYKQRKSGNVLVPVLSEEFDPHSQT KKSLKIQKKIIRELRDMFNVSAIFDIELMSKILMDLSSYKYNKMITKSLNILNKVYSSKTNMFNLSSKAQERAPEFLDLL GMVVKVVGTELTLKRNQAYVMKYIMQNYKKVAYVLDMSRAERDLWDYLSNLSIDMNRLTDSVKEDPDKIAIHLKTAPEKS ISMADKRMSEKARLELDELNIKCLQILRAIIHNEERKMPETWAVRTTEPKIMKSIKLITQIQNYMDKEGAMKKSLPHLST RNEDVAKEVLGFLCLMLFNANTSVQQSMLDYFLSTREEVFFMAVRDRMALSTNSIKEKRSLQAQLDAKKKETSKSFDSHL KKSFPISIQALKQIQAYEDALRQQRLSGWSRKKDNSKNDKKSSKKPKKPKPPKEKKVKKQHKVKDSATNGLKKELSFANP LMKEDQSLIVPVEHETEMVTIKVEDPEPEPVQQEPENPEEDESLEYRNDGYIELVLKVMARMCDGQNHHLQDYLREQPDN VKSFNIIGEVTRFLNVVYANITGKNIDLVIQCFETMNEFTAEVKDTLDKKAVIGLMTECYEMHQVDKKKIEELKHIADPL DVPDPKSKVKSLKDAGGTLFKGVVRKQKDEFADTYMDVGFRLYLVMARMCDVDTKLFDRFKLLPIELKAYNFYKKNCMSI EIVKDDELQKVNFRVKNKISILSDDQYNMALYIMGGLHNFFTLLVVVSYFLGNHPRMPNIRSIIASIKISSIYLEKRSVK VSKCIEDILMILMNLKTFKICITWRVSLLVDQVDQEFPRTHVAQLDQFRLVVSSNAFENFCLQNVLKFMKPESCSIISQS SSIVFRQACARKKKDDEVDDEKKKPHQSKLDAKFFSFQTFYYMLSGRTTPSRRYSDVGLATSMLGQSRLDLLPPPPSSFR ARRDRRSSISSRSGSPVRVEQLRRRSPSRYYDDPDDFGQMTPDRFDDRPRSPSRSRLGSDAEMRAITPSPLSRRDTLSGL SPRWPDSHAASPRGTVVFFSDADPFLPPPSFSRRGSVDRRGSDYIPESIEGPPYIPEFDLPERDHDTDSIRSGEYRGESR Y |
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