Gene
| Gene Model ID | pfu_aug1.0_3919.1_23432 |
|---|---|
| Locus | scaffold3919.1 : 2596 ... 3888 : + |
| To GenomeBrowser | scaffold3919.1:2596..3888 |
| Genes list of scaffold | scaffold3919.1 |
| Synonym | pfu_aug2.0_531.1_04306 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3919.1_23432.t1 | 2 | 1 | zf-B_box | 16 | 54 | 6.4e-16 | 57.9 | 1.6e-10 | 1.2e-07 | 31.5 |
| pfu_aug1.0_3919.1_23432.t1 | 2 | 2 | zf-B_box | 67 | 107 | 6.4e-16 | 57.9 | 8.1e-11 | 6.0e-08 | 32.4 |
| pfu_aug1.0_3919.1_23432.t1 | 1 | 1 | AAA_13 | 90 | 227 | 7.2e-06 | 24.7 | 1.1e-08 | 8.4e-06 | 24.5 |
Transcript
| Transcript ID | pfu_aug1.0_3919.1_23432.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3919.1_23432.t1 atggcgaccgcgccgtcaatgccaattttacaccaaacaattgttgaatgcgatggctgtgaagctgaaaaagatattac atggtattgtattacttgccgaactaatctttgtgacacttgtaaaacagctagagtacatagaaagcacacgataaagt catggcttgatcctgggtcaataagtgctcgacaggacaatccgattccatgtgcccaacacccggaagaaacgtgtcga aattactgcacaacatgtaaagtgctttcttgtccgatatgtgttgctggtacgcattcaggccatcaatttgagaccct tgataaagttttggaaagaaatcttaattctttgaaaagcaatttagccgagttaaaagacaagttcctaccgaaggcag agcggtcgatacaagagattcaaacgaaaatggatgatggcaagaaaaaatgcgcggaaaataaaactacgataaaactt aaggtagctgcattgacgaagcaattagctgagatggagacaagtctcacggaagcagaggatgaaataaacgagaaata ttcacaagatttgtcgaagcaactcgaagaagccggtatcaagaagaagcgaatttctgatagaatcaaagaaatcgaag atacgatttcaactatgaacaaatcaagcatcataaatgccccgacagagtcctcagatttgacagttttcgaaaccaag gatgttaagacaccatactatccagggtttaaagagacaacttttgtttttccaccttcaggatcaactattggggcttc agaaaaagtcaaggggtaa |
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Protein
| Protein ID | pfu_aug1.0_3919.1_23432.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3919.1_23432.t1 MATAPSMPILHQTIVECDGCEAEKDITWYCITCRTNLCDTCKTARVHRKHTIKSWLDPGSISARQDNPIPCAQHPEETCR NYCTTCKVLSCPICVAGTHSGHQFETLDKVLERNLNSLKSNLAELKDKFLPKAERSIQEIQTKMDDGKKKCAENKTTIKL KVAALTKQLAEMETSLTEAEDEINEKYSQDLSKQLEEAGIKKKRISDRIKEIEDTISTMNKSSIINAPTESSDLTVFETK DVKTPYYPGFKETTFVFPPSGSTIGASEKVKG |
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