Gene
| Gene Model ID | pfu_aug1.0_3900.1_52124 |
|---|---|
| Locus | scaffold3900.1 : 13651 ... 15855 : - |
| To GenomeBrowser | scaffold3900.1:13651..15855 |
| Genes list of scaffold | scaffold3900.1 |
| Synonym | pfu_aug2.0_1165.1_18144 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3900.1_52124.t1 | 4 | 1 | Cadherin | 55 | 69 | 1.50001e-40 | 137.3 | 0.58 | 4300.0 | -2.0 |
| pfu_aug1.0_3900.1_52124.t1 | 4 | 2 | Cadherin | 98 | 154 | 1.50001e-40 | 137.3 | 1.2e-06 | 0.0087 | 16.2 |
| pfu_aug1.0_3900.1_52124.t1 | 4 | 3 | Cadherin | 170 | 260 | 1.50001e-40 | 137.3 | 1.5e-25 | 1.1e-21 | 76.8 |
| pfu_aug1.0_3900.1_52124.t1 | 4 | 4 | Cadherin | 274 | 365 | 1.50001e-40 | 137.3 | 9.7e-15 | 7.2e-11 | 42.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3900.1_52124.t1 | gi|241758144|ref|XP_002401744.1| | conserved hypothetical protein [Ixodes scapularis] | 9.99967e-42 |
Transcript
| Transcript ID | pfu_aug1.0_3900.1_52124.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3900.1_52124.t1 atggaatttaaaggaaatctatcttcatggtccatccttataccagtattatgtatgtcgatttattcatatgttcagag tgctccatttctcaaaaatcctgttcgaaacgaagtgtatgagaaattcagaatagcagtagaggaaacattgcatcatg tgtataatgcatcagtgatggaagaacagaattcgggactacctgtaacagaaccattattccctccggtactttttgga gaactggatgcgaatatatcttttctgagagtatcgatggcaatctctgggagcactgtttttacactggatagtagctc aggacaagtgattgctaaaacgaaactggatagagagcttctgaatcactattccctgatggcaagggcaacctacgaaa ccgttcatgaaagtgaagttagatatcgattttcctcaataacatacgttgaaattaaggttcttgatgtcaatgataac agtccagattttgtgggcgatgttatgtcctgtagtgttccagaaaacaaaattgtaggctcacaaatttccaatcttac tgcaacagatatggatgaggggtttaacaaagaaatagagtatgaaatagctgatggcaatcatgaaggagtttttgcta ttgatgaattctctggtgttgtaacattgcaaaaaccgttagatttcgagaagacgcagcgatttgaactttcagtgatg gcgcacgacagaggtaatccatctctaagtagcacagcgaatatcaccgttgacatacttgatgtaaatgacaacaaacc tgaatttgaattttcaagttaccatggaaacatatctgaacacgttgaaattaatgaaactatattaagtattagggcac aagatgcggacagtggaattaacaaagagttggaatatttcatagtgcattctgataaagatattccattttatatgtca aatggcgatattaaggttgaaagaggaattgaaaggcaaaatcatggtcacgttttgtacaattttgatgttatagtaca cgacaagggtaaaccacctctgtcatccaccacacacgtccgaatctatgtactgcctttggctcaacccttggcatatg aaatagattctgattcttttaattcatttttgtttaaatgtctttttggcatgttcttttttatcatattgttgacctca atataa |
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Protein
| Protein ID | pfu_aug1.0_3900.1_52124.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3900.1_52124.t1 MEFKGNLSSWSILIPVLCMSIYSYVQSAPFLKNPVRNEVYEKFRIAVEETLHHVYNASVMEEQNSGLPVTEPLFPPVLFG ELDANISFLRVSMAISGSTVFTLDSSSGQVIAKTKLDRELLNHYSLMARATYETVHESEVRYRFSSITYVEIKVLDVNDN SPDFVGDVMSCSVPENKIVGSQISNLTATDMDEGFNKEIEYEIADGNHEGVFAIDEFSGVVTLQKPLDFEKTQRFELSVM AHDRGNPSLSSTANITVDILDVNDNKPEFEFSSYHGNISEHVEINETILSIRAQDADSGINKELEYFIVHSDKDIPFYMS NGDIKVERGIERQNHGHVLYNFDVIVHDKGKPPLSSTTHVRIYVLPLAQPLAYEIDSDSFNSFLFKCLFGMFFFIILLTS I |
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