Gene
| Gene Model ID | pfu_aug1.0_3900.1_52122 |
|---|---|
| Locus | scaffold3900.1 : 186 ... 5049 : + |
| To GenomeBrowser | scaffold3900.1:186..5049 |
| Genes list of scaffold | scaffold3900.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3900.1_52122.t1 | 1 | 1 | ATPgrasp_Ter | 102 | 305 | 3.4e-14 | 52.3 | 3.2e-17 | 4.8e-14 | 51.8 |
| pfu_aug1.0_3900.1_52122.t1 | 1 | 1 | ATP-grasp_3 | 124 | 304 | 2.9e-10 | 40.2 | 3.1e-13 | 4.6e-10 | 39.5 |
| pfu_aug1.0_3900.1_52122.t1 | 1 | 1 | ATP-grasp_4 | 130 | 306 | 1.9e-28 | 99.4 | 1.9e-31 | 2.8e-28 | 98.9 |
| pfu_aug1.0_3900.1_52122.t1 | 1 | 1 | CPSase_L_D2 | 132 | 302 | 1.5e-06 | 27.6 | 1.6e-09 | 2.4e-06 | 26.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3900.1_52122.t1 | gi|327260538|ref|XP_003215091.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3900.1_52122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3900.1_52122.t1 atgaggggaaagacgcttctgatgttgggctgcagaaaaactgatgctattgaaatcgcactgcatctaggcattgagct tgtcatagtgacttcaagaacctgtcgcaagaataccacgtatgaattgtttccgaatatttttcaatacaatttgtctg acaacttacgggatagagaacatacgttcagtataatttctttgctcaaagagaagaaaatcttcatcgatggatgttgc acttttgaagatgatctcacggttttgtcggccatgattgcggaggaacttgatcttgtttctccggaagtcgatggcgt attaagcgcgaaaaagaagagtcttttcttctggaagatgacatcaaagacaaatattgatgctgcgccatatgttgtcc ccacgtaccaaatacagagtgaacaaaacctgacttatttcatgacaaaaatgaattttcctcttatattgaagttagag catggcacaggatcggcaggtgttaaaattgctcaaacgcgggaggagtgtactaattcataccgaagcttacggataca aagtcaggctaataaaagacggggtggaaacggtttcggattcggcgatacatatgttataatggnaatggagtatgtta ggggaagtgaacatagtgttgacataatcatgttcaaaggggaattgattgcagttttcatcaaggataagttaacaacg tctgacggacgctttatggaatcatacgcaattatgccgtctggtatgtcttttgagaatcaaggggagatcactctagc ttcttatcggacttgtcgaaaaatcggtcttaacactggagtatttaatcttgatgtgatttttagtcaagacggaccaa aagtgattgaagtaaacgctcgaatgggagggaactaccacagagactggattaatcacctgtacaagtttgatctcgca gttgcgctatatcagataaacatcaaagaagtacctaacagctattcagtctcaggttcgagaaggcaaggccaaatcgt gagaattcccgtcggaacgtttgcgaaccccggcatgaaccgcattccgaagtga |
|
Protein
| Protein ID | pfu_aug1.0_3900.1_52122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3900.1_52122.t1 MRGKTLLMLGCRKTDAIEIALHLGIELVIVTSRTCRKNTTYELFPNIFQYNLSDNLRDREHTFSIISLLKEKKIFIDGCC TFEDDLTVLSAMIAEELDLVSPEVDGVLSAKKKSLFFWKMTSKTNIDAAPYVVPTYQIQSEQNLTYFMTKMNFPLILKLE HGTGSAGVKIAQTREECTNSYRSLRIQSQANKRRGGNGFGFGDTYVIMXMEYVRGSEHSVDIIMFKGELIAVFIKDKLTT SDGRFMESYAIMPSGMSFENQGEITLASYRTCRKIGLNTGVFNLDVIFSQDGPKVIEVNARMGGNYHRDWINHLYKFDLA VALYQINIKEVPNSYSVSGSRRQGQIVRIPVGTFANPGMNRIPK |
|