Gene
| Gene Model ID | pfu_aug1.0_3858.1_59338 |
|---|---|
| Locus | scaffold3858.1 : 2806 ... 7147 : + |
| To GenomeBrowser | scaffold3858.1:2806..7147 |
| Genes list of scaffold | scaffold3858.1 |
| Synonym | pfu_aug2.0_1052.1_08134 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3858.1_59338.t1 | 1 | 1 | Pkinase | 1 | 126 | 2.5e-37 | 128.4 | 5.40004e-41 | 2.7e-37 | 128.3 |
| pfu_aug1.0_3858.1_59338.t1 | 1 | 1 | Pkinase_Tyr | 3 | 107 | 2.0e-18 | 66.3 | 4.3e-22 | 2.1e-18 | 66.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3858.1_59338.t1 | gi|62857967|ref|NP_001016570.1| | aurora kinase A [Xenopus (Silurana) tropicalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3858.1_59338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3858.1_59338.t1 atgaaccagatgtttagtgcaatgatctactgtcatgaaaagaaggttatacatcgtgatattaaaccagaaaatttact catggggattaccggagagttaaaaatagccgattttggatggtctgtacatgcaccatcatctaggagaacaactctat gtggtacattggattacctccctccagaaatggtcgagggacgatctcacgacgaaaaagtagactactggagtctcggt atattaatgtacgagtttcttgtgggtaaacctccgtttgaagctgagacaaacacagagacgtacagacgaatcacaaa agtagatctacattttccttcctacgtatcagaaggcgctcgggacctcgtttctaaggtaagctag |
|
Protein
| Protein ID | pfu_aug1.0_3858.1_59338.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3858.1_59338.t1 MNQMFSAMIYCHEKKVIHRDIKPENLLMGITGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMVEGRSHDEKVDYWSLG ILMYEFLVGKPPFEAETNTETYRRITKVDLHFPSYVSEGARDLVSKVS |
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