Gene
| Gene Model ID | pfu_aug1.0_3723.1_30517 |
|---|---|
| Locus | scaffold3723.1 : 118849 ... 127335 : - |
| To GenomeBrowser | scaffold3723.1:118849..127335 |
| Genes list of scaffold | scaffold3723.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3723.1_30517.t1 | 2 | 1 | PigN | 4 | 293 | 0.0 | 299.7 | 0.0 | 0.0 | 299.7 |
| pfu_aug1.0_3723.1_30517.t1 | 2 | 2 | PigN | 310 | 317 | 0.0 | 299.7 | 0.24 | 3500.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3723.1_30517.t1 | gi|118086505|ref|XP_418994.2| | PREDICTED: GPI ethanolamine phosphate transferase 1 isoform X8 [Gallus gallus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3723.1_30517.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3723.1_30517.t1 atgacatcccagtatggttggtgtatatcatgtatattactatccatatttccattactacctgtggtagggagagatat caactataacttggtcctattagccggtgtattaggagttatcatagctgttatagctgtattaaagctgaatacctcag atagatctaaaagaaatactcatataggtctgttatttcagatttgtataatactcattatggtatcaacaatagtggtg tacactacatctcaaagtataaaagctgccacaggacttccctgggttaacagactcataagttggagtacactagcatc agcattagttttacctcttctgagtgagacgggaattcttcacagacttctcctgattgccttgtcagtcttaccaacct atttactacttagtatatcacatgagggtttatttattctgtgcttgtgtataacattgtacttttggctgcgtgtggag agtgaccagaataaaaagaaaacaccactagacaaagcagatttctgcatagaattgaagataggagacaatcaaagaca gcttgtgataagtgacatcaggagggctctgttctatatattttttattctcactgcattctttggaactggaaatatag ccagtataaacagctttgagccagcatctgtgtactgttttcttactgtgttcaacccctttgttatgggaacattgatg atgttaaagaatgtgataccgttaattctagtcagttgtgtgtttactgccattcatgtgacgtcacatatacccacaag ggctctgttcctactggttttgctcatgtctgacctcatggccataaacttctttttcctggttcaggactatggtagct ggttggagattggtacaagtataagtcactatgttatagtgatgtgtatgaacatcttcctcatgttactgtttgtactg tcaaatatcctcacatcgaagagaatctccctgaacaaagtcaaatcaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_3723.1_30517.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3723.1_30517.t1 MTSQYGWCISCILLSIFPLLPVVGRDINYNLVLLAGVLGVIIAVIAVLKLNTSDRSKRNTHIGLLFQICIILIMVSTIVV YTTSQSIKAATGLPWVNRLISWSTLASALVLPLLSETGILHRLLLIALSVLPTYLLLSISHEGLFILCLCITLYFWLRVE SDQNKKKTPLDKADFCIELKIGDNQRQLVISDIRRALFYIFFILTAFFGTGNIASINSFEPASVYCFLTVFNPFVMGTLM MLKNVIPLILVSCVFTAIHVTSHIPTRALFLLVLLMSDLMAINFFFLVQDYGSWLEIGTSISHYVIVMCMNIFLMLLFVL SNILTSKRISLNKVKSK |
|