Gene
| Gene Model ID | pfu_aug1.0_3665.1_08689 |
|---|---|
| Locus | scaffold3665.1 : 23006 ... 82865 : + |
| To GenomeBrowser | scaffold3665.1:23006..82865 |
| Genes list of scaffold | scaffold3665.1 |
| Synonym | pfu_aug2.0_784.1_14553 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3665.1_08689.t1 | 9 | 1 | VWC | 72 | 82 | 6.8e-15 | 54.9 | 0.45 | 6600.0 | -2.7 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 2 | VWC | 92 | 154 | 6.8e-15 | 54.9 | 4.1e-06 | 0.061 | 13.4 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 3 | VWC | 201 | 240 | 6.8e-15 | 54.9 | 0.00024 | 3.6 | 7.7 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 4 | VWC | 261 | 324 | 6.8e-15 | 54.9 | 1.0e-07 | 0.0015 | 18.5 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 5 | VWC | 355 | 417 | 6.8e-15 | 54.9 | 1.0e-05 | 0.15 | 12.2 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 6 | VWC | 473 | 535 | 6.8e-15 | 54.9 | 5.7e-08 | 0.00084 | 19.3 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 7 | VWC | 603 | 669 | 6.8e-15 | 54.9 | 6.6e-07 | 0.0097 | 15.9 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 8 | VWC | 723 | 785 | 6.8e-15 | 54.9 | 9.2e-08 | 0.0014 | 18.7 |
| pfu_aug1.0_3665.1_08689.t1 | 9 | 9 | VWC | 838 | 844 | 6.8e-15 | 54.9 | 1.0 | 15000.0 | -5.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3665.1_08689.t1 | gi|957315|gb|AAB34577.1| | Myc homolog, partial [Crassostrea virginica] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3665.1_08689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3665.1_08689.t1 atgtatgtgtatatcagggagtatcataccgtcaaggagctacatggaaagttggatgtgataccaaatgtacatgtgaa aatgctgtacatggttactacggttgtgtcagctcatgtcctacatacggacagatcccttactcctgtcattacgtatc agatccaaacgatccctgctgtcagaagccggtatgtaggcaacacacgcatcacttgtaatgattttttcataaattgt acatccagtacctatgatatttttacagcatactgtgtgtacaatggagctccatataaacaaggacagacctgggacca gggttgtaacaagaagtgccgatgtgatgatgccatgaataattactactcttgttatgacagatgcccatcctacaaca acctcccagatggttgtaagatgatgactgacccaagtgaccagtgctgtcagatccctgactgtcagaaggtacccacc cctagccccacctctggtacagactactgtccttacatgcctccattatcgctgggtaaaatatcaggaagtggaccaag aaccaaccctaatactggcctccctcagactattggatattgtgagtacaagggtaagaagtatcacactggtgacacct gggatgacgggtgttcgtacaactgtcagtgtatagaggacgccactggatcatacacgtgtacagagagatgccacaaa tttgccaatgtaccaagctacagtataatggtcacagatcccaaggatcaatgctatgtgtgcctgtacaatggtgtggc cttcaaacaaggtaatagctggcaggtgggatgtagtaagacgtgccgatgtgacgatgccaagactaacgtagtcaact gtgatgacaggtgccccacctatccagccctgtcagccaactgtaatttggtcactgatccaaatgatccttgctgtcaa gtagcacagtgtataaaccccaactctaccaatcctactcaagttgtcactggtgtagtaggctcctttacaaacacacc acaagttactaacacaagaagttgtgtgtacaagggcaagatctacactcaaggtcagaaatgggatgatggctgtgact ataaatgtgaatgtatggaccagatgaagggactttacaaatgtactcaaagatgtcaaggcttttcctcacttccctct gcttgccgcctcataccagatcctgcagacacgtgctgtgagaagccagactgcggcacataccagccatctgttggtgg tggcttcaatggcacagccactcctaagccacctaccggccttaatgtcttccctatcggcacacactcgttcttcaccg gctctggatggccaccaggatataataacattcttactcctggtcacagtgatgtttgtatctacaatggtacaatctac aaacaaggacagtcctggacagatggatgtaaatatacctgtacatgtgagaatgcagctaagggtctttacagatgtgt taccaagtgtccggtatacccagccttacccagctactgtcagtcagtgagggtaccaggatcatgttgtgagtcagtga gatgtgacgtgcctggatacggtacatacaacccctcaccacagataaaccccacccctggcccgggaatgacccctact ccacctactgccatgccaacagccaacccagtggtcaatcctaacccacccactacaatggtcagctcatggcctggaaa tggattccctatagccccaagcaacttctctgcagttacaagtcagtgtatctacaattccaaggtgtacagtcagggag agacatgggaggatggatgtgactacacatgtcaatgtatggatggaagaacaggatattatgaatgtaatcctaggtgt ccatcatatgacaaagctgccttggctggtgcaggatgttttgtacaagccaagaggggaacagaatgttgtgacactat acaatgctcactacctaatggcacactcattgagttcaagcccgacggaaaaggtccgatatccctggccggttatttct ctggtggcttctcaggattcagaccagatacaaacttccagcagatcttccctcagcagccatcaatctctggtacaaga gacaggtgtgtgtacaagggtatatcctataaacaaggagacacatgggatgatgggtgtgacttcagatgtgagtgtct ggatggtaaaacaggaaggtacaagtgtgacaagagatgccctgagtacaccaatctaccaagcacctgccagttgattg accaaccaggccagtgttgcaagaaattaacatgcaacctgcctccaaccaccacaccccaacctatcgtaactccacca ccacctacacccaatcctaaagtggactgtaatggtgtacaggacgccataccaaactgtgccaagtacggtcctacggc atgttcccagtatggaccatgggcaaagagaaactgtgcagcatactgtcagatatgtccctcaccaactggatggatta tcttgctgaagggtgtgtccggagttcctggggatctgtaccagctctggtcagggtctaacacttcctaccctaacaca cctgatgctcagaatctactggccaacttcccccaccactacaaacctgatctcactaacaactggaactcactctgctt agataagattaaggtatcagtctatgatcacggtaatgagaaggcttggattatatttgatgccacaaactcggacaaga caagctggttcacagctgacaggattatcaactcatcctacagtgatattaagactatgccaaaagacttcatctctcta caaaaggatcctagctttggtcgtgagttctatgttaacagtagaaccgtacaaggctgtgactctataggctggatcat ggtctccaccagtaataaatgtccgtatgagatcaagaacggacccgctttctactacgctccaggacagtctgctgtca attggggaagaatttactttgataaattacgtctgaaccgaatcgaaatctgcaattctacgtcgatgcatcgaaccgac aattctgatttcgaagcaccgagattttcggtgcaccgcccagccctaccagttttgtttaaattgatcattgaaaaagt tcaaatagcaattgaatag |
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Protein
| Protein ID | pfu_aug1.0_3665.1_08689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3665.1_08689.t1 MYVYIREYHTVKELHGKLDVIPNVHVKMLYMVTTVVSAHVLHTDRSLTPVITYQIQTIPAVRSRYVGNTRITCNDFFINC TSSTYDIFTAYCVYNGAPYKQGQTWDQGCNKKCRCDDAMNNYYSCYDRCPSYNNLPDGCKMMTDPSDQCCQIPDCQKVPT PSPTSGTDYCPYMPPLSLGKISGSGPRTNPNTGLPQTIGYCEYKGKKYHTGDTWDDGCSYNCQCIEDATGSYTCTERCHK FANVPSYSIMVTDPKDQCYVCLYNGVAFKQGNSWQVGCSKTCRCDDAKTNVVNCDDRCPTYPALSANCNLVTDPNDPCCQ VAQCINPNSTNPTQVVTGVVGSFTNTPQVTNTRSCVYKGKIYTQGQKWDDGCDYKCECMDQMKGLYKCTQRCQGFSSLPS ACRLIPDPADTCCEKPDCGTYQPSVGGGFNGTATPKPPTGLNVFPIGTHSFFTGSGWPPGYNNILTPGHSDVCIYNGTIY KQGQSWTDGCKYTCTCENAAKGLYRCVTKCPVYPALPSYCQSVRVPGSCCESVRCDVPGYGTYNPSPQINPTPGPGMTPT PPTAMPTANPVVNPNPPTTMVSSWPGNGFPIAPSNFSAVTSQCIYNSKVYSQGETWEDGCDYTCQCMDGRTGYYECNPRC PSYDKAALAGAGCFVQAKRGTECCDTIQCSLPNGTLIEFKPDGKGPISLAGYFSGGFSGFRPDTNFQQIFPQQPSISGTR DRCVYKGISYKQGDTWDDGCDFRCECLDGKTGRYKCDKRCPEYTNLPSTCQLIDQPGQCCKKLTCNLPPTTTPQPIVTPP PPTPNPKVDCNGVQDAIPNCAKYGPTACSQYGPWAKRNCAAYCQICPSPTGWIILLKGVSGVPGDLYQLWSGSNTSYPNT PDAQNLLANFPHHYKPDLTNNWNSLCLDKIKVSVYDHGNEKAWIIFDATNSDKTSWFTADRIINSSYSDIKTMPKDFISL QKDPSFGREFYVNSRTVQGCDSIGWIMVSTSNKCPYEIKNGPAFYYAPGQSAVNWGRIYFDKLRLNRIEICNSTSMHRTD NSDFEAPRFSVHRPALPVLFKLIIEKVQIAIE |
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