Gene
| Gene Model ID | pfu_aug1.0_3647.1_52057 |
|---|---|
| Locus | scaffold3647.1 : 3046 ... 6289 : + |
| To GenomeBrowser | scaffold3647.1:3046..6289 |
| Genes list of scaffold | scaffold3647.1 |
| Synonym | pfu_aug2.0_182.1_07115 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3647.1_52057.t1 | 4 | 1 | EF-hand_6 | 15 | 41 | 3.7e-21 | 73.0 | 2.3e-08 | 3.9e-05 | 23.1 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 1 | EF-hand_8 | 15 | 40 | 8.6e-10 | 38.0 | 0.00035 | 0.57 | 9.8 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 1 | EF-hand_1 | 16 | 40 | 4.4e-24 | 81.9 | 1.8e-07 | 0.0003 | 19.8 |
| pfu_aug1.0_3647.1_52057.t1 | 2 | 1 | EF-hand_10 | 16 | 40 | 9.6e-06 | 25.1 | 0.00021 | 0.35 | 10.5 |
| pfu_aug1.0_3647.1_52057.t1 | 3 | 1 | EF-hand_7 | 17 | 73 | 1.1e-22 | 79.9 | 3.1e-11 | 5.2e-08 | 32.9 |
| pfu_aug1.0_3647.1_52057.t1 | 2 | 1 | SPARC_Ca_bdg | 19 | 70 | 9.3e-06 | 25.6 | 0.0074 | 12.0 | 5.9 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 1 | EF-hand_5 | 21 | 38 | 2.4e-12 | 45.6 | 5.9e-06 | 0.0098 | 15.2 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 2 | EF-hand_1 | 56 | 76 | 4.4e-24 | 81.9 | 1.9e-07 | 0.00031 | 19.8 |
| pfu_aug1.0_3647.1_52057.t1 | 3 | 2 | EF-hand_7 | 56 | 76 | 1.1e-22 | 79.9 | 4.8e-06 | 0.0079 | 16.3 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 2 | EF-hand_6 | 56 | 76 | 3.7e-21 | 73.0 | 8.9e-06 | 0.015 | 15.1 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 2 | EF-hand_8 | 56 | 72 | 8.6e-10 | 38.0 | 0.0023 | 3.8 | 7.1 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 2 | EF-hand_5 | 57 | 71 | 2.4e-12 | 45.6 | 0.001 | 1.7 | 8.1 |
| pfu_aug1.0_3647.1_52057.t1 | 2 | 2 | SPARC_Ca_bdg | 84 | 150 | 9.3e-06 | 25.6 | 1.2e-06 | 0.0021 | 18.0 |
| pfu_aug1.0_3647.1_52057.t1 | 2 | 2 | EF-hand_10 | 93 | 117 | 9.6e-06 | 25.1 | 8.1e-05 | 0.13 | 11.9 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 3 | EF-hand_8 | 96 | 121 | 8.6e-10 | 38.0 | 0.00037 | 0.6 | 9.7 |
| pfu_aug1.0_3647.1_52057.t1 | 3 | 3 | EF-hand_7 | 97 | 152 | 1.1e-22 | 79.9 | 2.9e-16 | 4.8e-13 | 49.0 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 3 | EF-hand_1 | 98 | 119 | 4.4e-24 | 81.9 | 1.9e-08 | 3.1e-05 | 22.9 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 3 | EF-hand_6 | 98 | 123 | 3.7e-21 | 73.0 | 1.7e-07 | 0.00028 | 20.5 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 3 | EF-hand_5 | 98 | 119 | 2.4e-12 | 45.6 | 6.4e-05 | 0.11 | 11.9 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 4 | EF-hand_8 | 109 | 150 | 8.6e-10 | 38.0 | 3.2e-08 | 5.3e-05 | 22.7 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 4 | EF-hand_1 | 129 | 154 | 4.4e-24 | 81.9 | 9.0e-08 | 0.00015 | 20.8 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 4 | EF-hand_6 | 129 | 154 | 3.7e-21 | 73.0 | 5.1e-06 | 0.0084 | 15.9 |
| pfu_aug1.0_3647.1_52057.t1 | 4 | 4 | EF-hand_5 | 130 | 149 | 2.4e-12 | 45.6 | 8.7e-05 | 0.14 | 11.5 |
Transcript
| Transcript ID | pfu_aug1.0_3647.1_52057.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3647.1_52057.t1 atggcttcaagcttctttgacccaaaggcaccagatgttgctctgagaagtttatatatgaaatatgataaagatggtag cgggtctctggacaagaatgaattgaccacattcttcagggacgatttaggactgacagacgaccaaacagaagcgtaca atttaatgcttgataaagatggtgatgcaaaaatatcgtatgacgaacttgtttcatggttaaagagtggggaaagattc aagaatatcaacgacaattcacgttatcataggcttcaacatgctgtaacaatgttccagaaatatgataaagacggaaa tagctcgcttgatagggacgaattccggaatttactccttgaccttggagaaaaacctgagagattagattccgctttag cagcaatggacacagatggcaatggcgtcattgctttccaagaattcttgaaatggctgaattggataccattagacgaa ttttga |
|
Protein
| Protein ID | pfu_aug1.0_3647.1_52057.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3647.1_52057.t1 MASSFFDPKAPDVALRSLYMKYDKDGSGSLDKNELTTFFRDDLGLTDDQTEAYNLMLDKDGDAKISYDELVSWLKSGERF KNINDNSRYHRLQHAVTMFQKYDKDGNSSLDRDEFRNLLLDLGEKPERLDSALAAMDTDGNGVIAFQEFLKWLNWIPLDE F |
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