Gene
| Gene Model ID | pfu_aug1.0_363.1_29205 |
|---|---|
| Locus | scaffold363.1 : 37220 ... 42175 : - |
| To GenomeBrowser | scaffold363.1:37220..42175 |
| Genes list of scaffold | scaffold363.1 |
| Synonym | pfu_aug2.0_99.1_30208 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_363.1_29205.t1 | 3 | 1 | BTB | 87 | 192 | 1.0e-22 | 80.1 | 1.5e-25 | 7.5e-22 | 77.4 |
| pfu_aug1.0_363.1_29205.t1 | 2 | 1 | BACK | 167 | 192 | 7.9e-09 | 35.2 | 0.7 | 3400.0 | -2.1 |
| pfu_aug1.0_363.1_29205.t1 | 3 | 2 | BTB | 200 | 222 | 1.0e-22 | 80.1 | 0.45 | 2200.0 | -1.4 |
| pfu_aug1.0_363.1_29205.t1 | 2 | 2 | BACK | 206 | 299 | 7.9e-09 | 35.2 | 3.8e-12 | 1.9e-08 | 34.0 |
| pfu_aug1.0_363.1_29205.t1 | 1 | 1 | PHR | 349 | 495 | 2.8026e-45 | 154.3 | 0.0 | 4.2039e-45 | 153.6 |
| pfu_aug1.0_363.1_29205.t1 | 3 | 3 | BTB | 420 | 432 | 1.0e-22 | 80.1 | 0.58 | 2800.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_363.1_29205.t1 | gi|344279499|ref|XP_003411525.1| | PREDICTED: BTB/POZ domain-containing protein 3 isoform X3 [Loxodonta africana] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_363.1_29205.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_363.1_29205.t1 atggatagacccctgaaaaccgagcccaagagttgcttggtcaaacaaaatcgtgaattctccgacgatgagattaatca ggaggttccacagaactttgtaggcaaactgaccaacatccagcggcctgtacggcagaaagagccgtcctggcaaatac cactgaccccgcctccccgtctcccaacgtcaaaggcatgtgaagaattcaactggcaggcaaatcaaccaacggtcagg gagagaaatgctgtcatgtttaacaatcaactgatggcggatgtgtactttaaagttggcagtgctcctacgatacagag aattccggcacataagtatattttggcaacgggaagttctgttttcttcgccatgttttatggaggtctggccaatcacg agggggacgtaaaaatacctgatgttgaaccaggggctttccttaatcttctcaggtacttgtattgtgatgaaatccaa ttggagcctgacaatgtgcttgctacactctacgctgccaagaaatatttagtcccgcacctcgccagatcatgtgtgcg ttttcttgagacaagtctgagtgctagaaacgcttgtatcctgctcagtcagggacgactttttgaagaacaagaactaa tgcagaggtgttgggaagtgattgatgcacaggcagaagaggcgttacgctccgacggttttacagatatcgacataaac actcttaaaactgttctaagtagagaaacactgaatgctaaggaagtatctgtgttcaatgcagcgtgtagatgggcgga ggcggaatgtgcaaggaacgagttagatcccacgcctgaaaataaacgtaaagttttgggggaggcgttgtaccttatca ggatacccaccatgtctttggacgaatatgctaatggtccaagccaatctggtattctgacgttacaagagacgaatgac gtttttttgtattacttagcgaggaacaagccagatttaagatttttaaagaaagctcgacctggtttgacgccctataa atgccaccgttttcaatcgtctgcatatcggagcaatcaatggcgatacagggggcgatgtgacagtatacaatttgccg tcgataatcgggttttcgttgcagggttcggactgtatggatcaagtaatggtgcggcagaatatcaagtgaagatcgaa ctgaagaaaaatggaatcgttttaggtcagagctataaaaagttcttttccgacggctcaagcagtacatttgctgtgat gtttgagaatccaatccagatcgagcctgatatattttacacggccagtgcagtgctagatggaggagaactcagctatt ttggacaagagggccttagcgaggtgcagtgcggaaaaaccaactttcagtttcagtgttcgtcagacagtaccaacggt acaggtgtccaagggggacaaatcccagaaatcatattctactgttaa |
|
Protein
| Protein ID | pfu_aug1.0_363.1_29205.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_363.1_29205.t1 MDRPLKTEPKSCLVKQNREFSDDEINQEVPQNFVGKLTNIQRPVRQKEPSWQIPLTPPPRLPTSKACEEFNWQANQPTVR ERNAVMFNNQLMADVYFKVGSAPTIQRIPAHKYILATGSSVFFAMFYGGLANHEGDVKIPDVEPGAFLNLLRYLYCDEIQ LEPDNVLATLYAAKKYLVPHLARSCVRFLETSLSARNACILLSQGRLFEEQELMQRCWEVIDAQAEEALRSDGFTDIDIN TLKTVLSRETLNAKEVSVFNAACRWAEAECARNELDPTPENKRKVLGEALYLIRIPTMSLDEYANGPSQSGILTLQETND VFLYYLARNKPDLRFLKKARPGLTPYKCHRFQSSAYRSNQWRYRGRCDSIQFAVDNRVFVAGFGLYGSSNGAAEYQVKIE LKKNGIVLGQSYKKFFSDGSSSTFAVMFENPIQIEPDIFYTASAVLDGGELSYFGQEGLSEVQCGKTNFQFQCSSDSTNG TGVQGGQIPEIIFYC |
|