Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_363.1_29203
Locus scaffold363.1 : 27828 ... 29285 : -
To GenomeBrowser scaffold363.1:27828..29285
Genes list of scaffold scaffold363.1
Synonym pfu_aug2.0_99.1_30206

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_363.1_29203.t1 1 1 DUF4508 7 102 1.0e-35 121.6 1.6e-39 1.2e-35 121.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_363.1_29203.t1 gi|348605163|ref|NP_001007178.3| uncharacterized protein C14orf119 homolog [Danio rerio] 3.0e-23

Transcript
Transcript IDpfu_aug1.0_363.1_29203.t1
Definition-
>pfu_aug1.0_363.1_29203.t1
atggcaatttcttcaacggagatggaagtacaaagtgtaatacactggtttcagggttggagtcccatgcaaaagggaga
ttttatgaaagacctgatcaataaggcagtgccaataaatgtcgacagtttgtttgactctatgcatacattgaatgtga
aggatagaccaccaagtattttccagtgccagttacgactttttacccagtggtttgaaacgtggtcagaaaaagatcgt
aatgacttcatgattaaattgcggatagctgatcctgcttttgtcgcaaagtttgacgaagaagtgaaattgctgatgca
gaaaaattgtaatggagttggtgatggatga

Protein
Protein IDpfu_aug1.0_363.1_29203.t1
Definition-
>pfu_aug1.0_363.1_29203.t1
MAISSTEMEVQSVIHWFQGWSPMQKGDFMKDLINKAVPINVDSLFDSMHTLNVKDRPPSIFQCQLRLFTQWFETWSEKDR
NDFMIKLRIADPAFVAKFDEEVKLLMQKNCNGVGDG

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