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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_362.1_15039
Locus scaffold362.1 : 59735 ... 69775 : -
To GenomeBrowser scaffold362.1:59735..69775
Genes list of scaffold scaffold362.1
Synonym pfu_aug2.0_269.1_30535

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_362.1_15039.t1 1 1 Glutaminase 120 406 0.0 378.3 0.0 0.0 377.8
pfu_aug1.0_362.1_15039.t1 1 1 Ank_2 437 517 4.0e-09 36.6 4.6e-12 1.1e-08 35.2
pfu_aug1.0_362.1_15039.t1 1 1 Ank_4 438 481 7.3e-08 32.7 1.2e-10 3.0e-07 30.7
pfu_aug1.0_362.1_15039.t1 1 1 Ank_5 455 496 1.0e-05 25.5 1.1e-08 2.8e-05 24.1
pfu_aug1.0_362.1_15039.t1 1 1 Ank 461 493 9.0e-08 31.5 1.1e-10 2.7e-07 30.0
pfu_aug1.0_362.1_15039.t1 1 1 Ank_3 461 488 6.0e-06 25.9 9.2e-09 2.3e-05 24.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_362.1_15039.t1 gi|224055887|ref|XP_002191448.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 5
egg-Dshape 1
>Adult tissues
Dshape 2

Transcript
Transcript IDpfu_aug1.0_362.1_15039.t1
Definition-
>pfu_aug1.0_362.1_15039.t1
atgagtgaggaactagactggaaagcggaagattttgaggacaggttatttgatacacttgcagattcagatggaagagt
gctgattaaaaaattcaaaaagatcctgcatgaaacaggattacgggacagtgaccctcgtcttaaacaatgcatgaaca
actttaaaaaggttcaaacgacatcagaaagcggagaacatggcgggacggtggacaggaaatcctttaaggaatgcatt
tcggacaatattatgctaatatccaaagctgtaaaaaattctttcatcataccagatttcagcgacttcaaagatatcat
ccacaagctctacttggaatgcaaatcaaaaacaggtggccaggtggcttcatacataccccagctggcaaggtacagtc
cagaattatgggcagtgtccatttgtacaatagacggacaaagatactcaataggagacgttaatgtgccattttgtctt
cagtcaaccagtaagcctttgacatatgccctcgctcagaatgagtatgaccccgactatgtccacaaatatgttggtca
tgaacccagtggacgaagtttcaacgaaatctctctgaatatgcacaacaaaccacacaaccctatgatcaactctggag
caatcatgatggcgtccctcgtcagaccagatctcaaaatggcagatagatatgactatatgtgcaactacatcaaaagg
ttgacaggaggggaatacgtggctttcaacaacgctgtgtacttatcagaaaaagacaccgccgacagaaattttgcact
aggatattacatgcgtgaaaataattgtttcccgcctggtacgaagttccaagagataatggaattttacttccagctct
gttcaatagaagtaacatctgattcggcagccgtgattgctgctacccttgccaatggtggatattgtccaatcacagac
gagaaaatattatctgcatcgtccgtccgtaacactctgtcgctgatgcattcatgtgggatgtatgattggtcaggaga
atttgcttttactgttggtctgccggggaaatcgggcgtgtcagggtgtgtcctgttggtggtgcctaacgtgatgggta
tttgtgtttggtcaccgccattggacaaatttggaaacagtgttagaggtgtacatttctgccagggtcttgttagcaac
ttcaatttccatcagtttgacaaagttacatacgactccaagaaaattgacccgaccaaaaacaagttggagaacagagc
tatggacgtgttcaatgtattgtttggtgctttcagtggtgacgtcactgctgtaagaaggtactacttgctgggaatag
atatggacattcaggattacgatggtaggacagctttacatctcgctgcatcagagggtcatcttgatgttgtaaagttt
ctcgcggagaaatgcaattgtgatccattttccaaagacagatggtcaaaccttccggtaaacgacgctgagaaatttgg
acacgaagagatagccgcattattaaagaagtacatgaagacgtatataaaacaacagaaagaagggaaagaacggagag
cctcattgcgtatcgattaa

Protein
Protein IDpfu_aug1.0_362.1_15039.t1
Definition-
>pfu_aug1.0_362.1_15039.t1
MSEELDWKAEDFEDRLFDTLADSDGRVLIKKFKKILHETGLRDSDPRLKQCMNNFKKVQTTSESGEHGGTVDRKSFKECI
SDNIMLISKAVKNSFIIPDFSDFKDIIHKLYLECKSKTGGQVASYIPQLARYSPELWAVSICTIDGQRYSIGDVNVPFCL
QSTSKPLTYALAQNEYDPDYVHKYVGHEPSGRSFNEISLNMHNKPHNPMINSGAIMMASLVRPDLKMADRYDYMCNYIKR
LTGGEYVAFNNAVYLSEKDTADRNFALGYYMRENNCFPPGTKFQEIMEFYFQLCSIEVTSDSAAVIAATLANGGYCPITD
EKILSASSVRNTLSLMHSCGMYDWSGEFAFTVGLPGKSGVSGCVLLVVPNVMGICVWSPPLDKFGNSVRGVHFCQGLVSN
FNFHQFDKVTYDSKKIDPTKNKLENRAMDVFNVLFGAFSGDVTAVRRYYLLGIDMDIQDYDGRTALHLAASEGHLDVVKF
LAEKCNCDPFSKDRWSNLPVNDAEKFGHEEIAALLKKYMKTYIKQQKEGKERRASLRID

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