Gene
| Gene Model ID | pfu_aug1.0_3538.1_52013 |
|---|---|
| Locus | scaffold3538.1 : 13789 ... 18835 : - |
| To GenomeBrowser | scaffold3538.1:13789..18835 |
| Genes list of scaffold | scaffold3538.1 |
| Synonym | pfu_aug2.0_6034.1_16168 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3538.1_52013.t1 | 2 | 1 | EF-hand_8 | 49 | 92 | 8.5e-09 | 34.8 | 4.3e-08 | 9.1e-05 | 21.9 |
| pfu_aug1.0_3538.1_52013.t1 | 3 | 1 | EF-hand_6 | 49 | 60 | 1.4e-08 | 33.8 | 0.26 | 540.0 | 0.9 |
| pfu_aug1.0_3538.1_52013.t1 | 2 | 1 | EF-hand_7 | 53 | 91 | 4.0e-07 | 30.0 | 1.7e-06 | 0.0036 | 17.4 |
| pfu_aug1.0_3538.1_52013.t1 | 2 | 1 | EF-hand_1 | 67 | 91 | 9.3e-11 | 40.2 | 5.9e-09 | 1.3e-05 | 24.1 |
| pfu_aug1.0_3538.1_52013.t1 | 3 | 2 | EF-hand_6 | 67 | 91 | 1.4e-08 | 33.8 | 5.6e-06 | 0.012 | 15.4 |
| pfu_aug1.0_3538.1_52013.t1 | 2 | 2 | EF-hand_8 | 102 | 126 | 8.5e-09 | 34.8 | 7.8e-06 | 0.016 | 14.7 |
| pfu_aug1.0_3538.1_52013.t1 | 2 | 2 | EF-hand_1 | 104 | 127 | 9.3e-11 | 40.2 | 4.4e-07 | 0.00093 | 18.3 |
| pfu_aug1.0_3538.1_52013.t1 | 3 | 3 | EF-hand_6 | 106 | 128 | 1.4e-08 | 33.8 | 4.0e-06 | 0.0084 | 15.9 |
| pfu_aug1.0_3538.1_52013.t1 | 2 | 2 | EF-hand_7 | 106 | 127 | 4.0e-07 | 30.0 | 3.0e-05 | 0.063 | 13.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3538.1_52013.t1 | gi|326926322|ref|XP_003209351.1| | 1.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_3538.1_52013.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3538.1_52013.t1 atgtatgttatcacccgaggggtccgaccgacattcaaagaggacaggtggtcggggccctgtcttgtatttgaaagacc aaggcaaggaaaaggtggaaagaaattgtcaaagagcgcattatcaactattcatcagattaacttgaccaggagagagt ttgctgatatactgggaatgaaatctaactctgaattcatcaataacatgttcctccttgtagacagggatcaaaatggc ttcatcagttttagagagtacctggatttctttgttgtgctagcgaaaggagacgccatggacaaagcggagctcatgtt caaaatgtacgatatcgattacaatggatatttgacaaagatagagttcacgaatatgatcaggtaa |
|
Protein
| Protein ID | pfu_aug1.0_3538.1_52013.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3538.1_52013.t1 MYVITRGVRPTFKEDRWSGPCLVFERPRQGKGGKKLSKSALSTIHQINLTRREFADILGMKSNSEFINNMFLLVDRDQNG FISFREYLDFFVVLAKGDAMDKAELMFKMYDIDYNGYLTKIEFTNMIR |
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