Gene
| Gene Model ID | pfu_aug1.0_34715.1_26691 |
|---|---|
| Locus | scaffold34715.1 : 1 ... 19913 : - |
| To GenomeBrowser | scaffold34715.1:1..19913 |
| Genes list of scaffold | scaffold34715.1 |
| Synonym | pfu_aug2.0_99.1_30203 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_34715.1_26691.t1 | 2 | 1 | MMPL | 243 | 321 | 1.9e-06 | 26.8 | 0.0098 | 72.0 | 1.9 |
| pfu_aug1.0_34715.1_26691.t1 | 2 | 1 | Patched | 249 | 358 | 9.2e-08 | 30.4 | 2.2e-07 | 0.0017 | 16.4 |
| pfu_aug1.0_34715.1_26691.t1 | 2 | 2 | Patched | 577 | 728 | 9.2e-08 | 30.4 | 2.1e-08 | 0.00015 | 19.8 |
| pfu_aug1.0_34715.1_26691.t1 | 2 | 2 | MMPL | 582 | 748 | 1.9e-06 | 26.8 | 2.6e-10 | 1.9e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_34715.1_26691.t1 | gi|240952270|ref|XP_002399364.1| | hypothetical protein IscW_ISCW000123 [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_34715.1_26691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34715.1_26691.t1 aatttagtatatgatttgaaagtacatgtagctgttgttgaaatcagacaggaaatgctcactttccccatgcatctgtt tacgtttcttcattatagggatggtcagtataacaacttggccaggatagtgtaccagagctcggatggttccaatctct tcactgctgacaaactccaccagatgtgtaatacggaatctaccagcattcaagctcaccatacattccccggtatctgc caagtcaaggagagcggccactgctgtccgagctggtctctggcaaactacgtggccttcctctccggcaaacctagctg ccaaaatataacagacgacgacgtcatggcggtgtctagactcttacaaagctgtgccggtcactactctaaccgttcac tcacttccaactgtgataactcattccaacacacgtcctcattctcgcgatccaggtcatgtaaaggtgtaccaaaatcc tgcactcgttttaatatcgtctacaacatactgcatcatatcactgatattaatttcgttcatccaaccaggaattccgg taaacccttcctgacgtacgccgtcacctttttacccgtagccgggagtatcagtaccgtagagctctacgagcatttgg aaaacgtagcagacgagatgtcaggtgacgtcagaatcgctggcgcgcatttcggaatcaagtacacgctttttggagag tacttaaggagtgatacattgtttctcggtatagcagcttttattatatttattgtggtttggctgtacaccacttcgct ttttatcaccataatgacgttcatcatgatgttttggtctttagaaatggcgtactttgtttatacaatgatcctagaac tggtgttctttccttacatgaaccttgtagccgttatcattatcatcgccatcggagcagacgatgtttttctctacagt aaagtgtggcactcggcgaaatcttcacgaaacaatggcacactggaaaagattgtttacgacaccatcaagcacgccac tctgtcgatgtttgtgacgtcatttactactgcgtcagctctactgacagtattttcatcgagtcatctactagaacgat atgatttcatgctcaataaacaattttggttcgagaaggtgcataagaaacacgcctttctccccctcacgttcgtctgg ggagtttaccccacggacgacggctcacacctagacccggccgactcggggaacctcgtctttgataaagtcttcgatgc aacatctagtgaagctcaaatctggttgctcaaattttgtcagcatatacgcaagtctgatttttatcgtcgcatacccg gcctacagatcacgaactgcttctttgacaatttccacaacaattacatgtcccgaccttgctgggatgggatagaggac catcgaccgtgttgtaacaagactgattacaaacttgacagcgtgacggtctttgaatgtttgatgcgatacattccact actagagaagacaaacggggtctcctattcccactatagccccggtcccagattccatcaaggtcgcctcagtgccttcc tcgttcaatttcttagcaacactcaattttctacttcatacgatgaaatcaaaacttttcatacgacagtggagcgcttc cttaaggacgaattgacgacggctccaaaatcattaaaaaacggctggttcgttagcgacttgggattttatgatctaca gcacagcttagcaacggaaactcctatagctatcggggtttccctggctgtggttgccttggtaacgtttataacgactc tgaatattttgatcagcttactgtccattattagtatagcttgtgttatgtttgtaaccatttctattatggtgctcatg aactgggagctcaatatattagaatccgttgttgttacagttgcgataggtttgtccgtggattacactctacattatgg ggtgtcgtatagactcctaccggacctccagcgtgacgcgcgggtcgccacgtccacggcgggcatcagtggggttattt cctcggcagctcttaccacattccttgcaggggcaatgatgatgccttccacagtgttagtgtatcagaaatttggtatt tttctaatgattatcatctccattagttgggcatattccacattctttttccaatcgttactgtgttgtataggacctaa gggtagcttcggtcagtaccactggccgtcgtgcgactgctgctcaaattccgctcattcgcatgtggacaagactgtgt attctatgtccgagtccaccgtatcaactgctagtacctatccacacactagcagcacggtaagtgacgtcagagagttc gaatcggtgtctgaaagcttgactgtgactccgcatccaactccacatcatcatcctcgtaggtcaaagttcaggggtca ttacatgaaagcgcgcacgcgcagtgacagtcctgaattagatccgcattgtcgtagagaaagtcacgtgcgtttttctg tgagtagcatagaacaacatatagacccggatgatgatcatactccatatcattcgaaacgaaggtcaaggacagattcc gttttcgaagaaccggaaccggaagttggtagcagacgagcgagcgaagcgactgcgaaaagtgaaatcacacagtcttc cacattaagctcaaaaatatataaatcgtcctgtgatgagtggacctggcctctacgatcctacaaccataatgaatgcc gatga |
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Protein
| Protein ID | pfu_aug1.0_34715.1_26691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34715.1_26691.t1 NLVYDLKVHVAVVEIRQEMLTFPMHLFTFLHYRDGQYNNLARIVYQSSDGSNLFTADKLHQMCNTESTSIQAHHTFPGIC QVKESGHCCPSWSLANYVAFLSGKPSCQNITDDDVMAVSRLLQSCAGHYSNRSLTSNCDNSFQHTSSFSRSRSCKGVPKS CTRFNIVYNILHHITDINFVHPTRNSGKPFLTYAVTFLPVAGSISTVELYEHLENVADEMSGDVRIAGAHFGIKYTLFGE YLRSDTLFLGIAAFIIFIVVWLYTTSLFITIMTFIMMFWSLEMAYFVYTMILELVFFPYMNLVAVIIIIAIGADDVFLYS KVWHSAKSSRNNGTLEKIVYDTIKHATLSMFVTSFTTASALLTVFSSSHLLERYDFMLNKQFWFEKVHKKHAFLPLTFVW GVYPTDDGSHLDPADSGNLVFDKVFDATSSEAQIWLLKFCQHIRKSDFYRRIPGLQITNCFFDNFHNNYMSRPCWDGIED HRPCCNKTDYKLDSVTVFECLMRYIPLLEKTNGVSYSHYSPGPRFHQGRLSAFLVQFLSNTQFSTSYDEIKTFHTTVERF LKDELTTAPKSLKNGWFVSDLGFYDLQHSLATETPIAIGVSLAVVALVTFITTLNILISLLSIISIACVMFVTISIMVLM NWELNILESVVVTVAIGLSVDYTLHYGVSYRLLPDLQRDARVATSTAGISGVISSAALTTFLAGAMMMPSTVLVYQKFGI FLMIIISISWAYSTFFFQSLLCCIGPKGSFGQYHWPSCDCCSNSAHSHVDKTVYSMSESTVSTASTYPHTSSTVSDVREF ESVSESLTVTPHPTPHHHPRRSKFRGHYMKARTRSDSPELDPHCRRESHVRFSVSSIEQHIDPDDDHTPYHSKRRSRTDS VFEEPEPEVGSRRASEATAKSEITQSSTLSSKIYKSSCDEWTWPLRSYNHNECR |
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