Gene
| Gene Model ID | pfu_aug1.0_3447.1_08613 |
|---|---|
| Locus | scaffold3447.1 : 1 ... 8655 : - |
| To GenomeBrowser | scaffold3447.1:1..8655 |
| Genes list of scaffold | scaffold3447.1 |
| Synonym | pfu_aug2.0_2373.1_12136 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3447.1_08613.t1 | 2 | 1 | Abhydrolase_6 | 13 | 61 | 7.7e-14 | 52.1 | 0.17 | 310.0 | 1.0 |
| pfu_aug1.0_3447.1_08613.t1 | 1 | 1 | Abhydrolase_5 | 147 | 258 | 9.4e-16 | 57.8 | 8.1e-19 | 1.5e-15 | 57.2 |
| pfu_aug1.0_3447.1_08613.t1 | 2 | 2 | Abhydrolase_6 | 147 | 256 | 7.7e-14 | 52.1 | 3.6e-16 | 6.7e-13 | 49.0 |
| pfu_aug1.0_3447.1_08613.t1 | 1 | 1 | Abhydrolase_1 | 174 | 232 | 3.6e-07 | 29.9 | 3.0e-10 | 5.5e-07 | 29.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3447.1_08613.t1 | gi|213982867|ref|NP_001135601.1| | monoacylglycerol lipase ABHD12 [Xenopus (Silurana) tropicalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3447.1_08613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3447.1_08613.t1 atgaaacggacgcttcgattggttcaaagaaagaattcggccaatcaaattgcacgtgtcgttttggggattttggacaa agtgggcgtttccttcctgctgttgatatcttttggcaatatatatggactatatgcagttgacatgttgcagtctcttt tcaactatgtagctgttactgtcattttcctgtatggattacttcccctgatagccaaaacaaatccttggattcttcag aaaattgttttcttgaatgaagttgcctggccgccatcttctgcagtgaaaaacccacaaaagcgtggcctgaaaggggc gaaaaatttctatttggacgttacagaagatactaacataggtgtctggtatgtgccacctcaagaattacaagataaac aagttgatgacatcgatttgaagcagggctatcccataatcctctatctccatggcaacactagcaacagagcagctagt catagagtggagctgtacaaagtcctagctaacatgaattatcatgtccttattattgactatagaggatatgctgacag taaaggtgtcccttcagaggaaggcgtggtccaagattctttacacatgtataaatggatcaaggaaaggagtggggaca cacccatttttctctggggtcattccttaggtactggtataggttcaagattagccaaacatctttgtgaaacgggtgag gcacctaatggtttggtcttagaagctccattcaccaatgtcaaggacgccgcagcaaatcatcctttttcctac |
|
Protein
| Protein ID | pfu_aug1.0_3447.1_08613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3447.1_08613.t1 MKRTLRLVQRKNSANQIARVVLGILDKVGVSFLLLISFGNIYGLYAVDMLQSLFNYVAVTVIFLYGLLPLIAKTNPWILQ KIVFLNEVAWPPSSAVKNPQKRGLKGAKNFYLDVTEDTNIGVWYVPPQELQDKQVDDIDLKQGYPIILYLHGNTSNRAAS HRVELYKVLANMNYHVLIIDYRGYADSKGVPSEEGVVQDSLHMYKWIKERSGDTPIFLWGHSLGTGIGSRLAKHLCETGE APNGLVLEAPFTNVKDAAANHPFSY |
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