Gene
| Gene Model ID | pfu_aug1.0_3389.1_30407 |
|---|---|
| Locus | scaffold3389.1 : 33166 ... 37874 : + |
| To GenomeBrowser | scaffold3389.1:33166..37874 |
| Genes list of scaffold | scaffold3389.1 |
| Synonym | pfu_aug2.0_875.1_17903 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3389.1_30407.t1 | 2 | 1 | DUF3504 | 12 | 166 | 1.3e-23 | 83.6 | 3.2e-27 | 2.4e-23 | 82.7 |
| pfu_aug1.0_3389.1_30407.t1 | 1 | 1 | Phage_integrase | 43 | 221 | 1.4e-08 | 34.6 | 2.9e-12 | 2.2e-08 | 33.9 |
| pfu_aug1.0_3389.1_30407.t1 | 2 | 2 | DUF3504 | 185 | 220 | 1.3e-23 | 83.6 | 0.26 | 1900.0 | -1.6 |
Transcript
| Transcript ID | pfu_aug1.0_3389.1_30407.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3389.1_30407.t1 atgggcaacaagcccaaaacggctgaacgaataaccgattctgatattgaggccttgtacttatctggtgaattgggaac aagtaccccgaatagtattctaaacacgctttggtacaacaacactttgcttttcgggatgaggggtggtgcagaggaac acagatcgctgcgatggggtgacgtacgactagcctatgatgtcgagcttaaaaaagaatatttagaatacaacgaaagg caaaccaagacacgaaccggcgctgatgtatccctctacagaaataaacctaggatgtatgctatggccgaaaacccaca acgatgtccgatagaagtttacaaaacttaccgcgataaaaggccggctcagtactccgcacctgatgatcctttctatg tcgccgccactaccaaacataatcctggacctcactatgcgtggttttcaagatgtcctgtcggtgttaacaaattacga tccatgatgaaacgtatggtgtccaatgctgatctcaaatcggataaacgtcttacaaatacttcagttcgaaagcacct ctgccagaaattattagaaaataacgtccccgacactcaagccattcatattactggacataagaatccgaactcgttga ataactaccgctccatcaacaatgcacagaaagaaaacatatcttcccttctttgtgattctgaaaaccgtcat |
|
Protein
| Protein ID | pfu_aug1.0_3389.1_30407.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3389.1_30407.t1 MGNKPKTAERITDSDIEALYLSGELGTSTPNSILNTLWYNNTLLFGMRGGAEEHRSLRWGDVRLAYDVELKKEYLEYNER QTKTRTGADVSLYRNKPRMYAMAENPQRCPIEVYKTYRDKRPAQYSAPDDPFYVAATTKHNPGPHYAWFSRCPVGVNKLR SMMKRMVSNADLKSDKRLTNTSVRKHLCQKLLENNVPDTQAIHITGHKNPNSLNNYRSINNAQKENISSLLCDSENRH |
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