Gene
| Gene Model ID | pfu_aug1.0_3224.1_23251 |
|---|---|
| Locus | scaffold3224.1 : 45926 ... 54736 : + |
| To GenomeBrowser | scaffold3224.1:45926..54736 |
| Genes list of scaffold | scaffold3224.1 |
| Synonym | pfu_aug2.0_1216.1_21469 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3224.1_23251.t1 | 2 | 1 | Endonuclease_7 | 116 | 154 | 6.4e-08 | 32.1 | 6.7e-07 | 0.0025 | 17.5 |
| pfu_aug1.0_3224.1_23251.t1 | 2 | 2 | Endonuclease_7 | 177 | 216 | 6.4e-08 | 32.1 | 2.6e-07 | 0.00095 | 18.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3224.1_23251.t1 | gi|221111895|ref|XP_002155621.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3224.1_23251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3224.1_23251.t1 atgtcatcagaggaagataaatggttgagattcacggatgtttcaacacaactgaaagtcccttttgtcgtgtatgcaga ctttgagtgtattttagagaagatatatggttgccaaccagatgcatcaaaatcctcaaccgttaaactagctaaacaca aaccatccggatttacctataaagtcgtcggtcttaacaaagatctcgtcgaggatcatgtgacctacagaggtccagat gcggcagacgtttttatagatcacatggtcgtgttagaggagcgcccgatacacgtcgtccgaaattctaaacctatgga gttgacagacgacgattttgaatcattccaaaaagcaacgcactgcagcatttgtggaggagaacttggtggggacgtgg cacgtgatcattgtcatctcactggcaaatttagaggagctgcacacatatcgtgtaatcttaattatangatacacgtc gtccgaaattctaaacctatggagttgacagacgacgattttgaatcattccaaaaagcaacgcactgcagcatttgtgg aggagaacttggtggggacgtggcacgtgatcattgtcatctcactggcaaatttagaggagctgcacacatatcgtgta atcttaattataaattaagagagcgaatatcagtattttttcacaatcttcggggatatgacgcccatctcatcatggaa tccattggaaaagtcaaaaaccgacggctgaactgtattccacaaaaccacgaaaaatacatcttcttctccctgggaag aatagagtttatcgacaccttccagtttctatccactagtcttcagaaattggcagccctcaagatgacagatgttgcac tggaattgttcacagatcctgacatgcacttatttatcgaaaaagagcttctaaaagatcttggcatgaaagcaacgaaa tgttccaaactattaccgaatctacacgacaaacagaattacgttttacattatcgaaatttacaactctacctttcact cggcatgaaattaaagaaaattcaccgggtgttgagtttccagcagagtccctggttgaagccctacatcgacttcaata ccaacatgcgcaaagaggccaaaaatgaatttgaaaaggacttttataaactcacgaataactccgtatttggcaaaacg atggagaacttgagaaaacgtgtcgatattcaactagtcaaccaggaaaagcggcttctgaagctgaccaagaaaccggg cttcaaatcgtttaaaatcttcaatgaagacttggtctctatcgagcttcaaaaagccaaattagttctaaaccgaccca tctacgtcggtttcagcattctagacctgtctaaagtcctaatgtatgacctccactacaattacatcaagcataaatat gggaatgctgcacaactactgtttactgataccgattcattatgctacgacattaaaaccgatgatatcttcaatgacat ggcggaggataagcatctgtttgactttagtggatataaaaaagaccaccccctttacgatgcaaacaacaaaaaggtga tagcatcacaggaactacagagcagtcaagcgtatacgccgccaccgccgcgcagtcaagcgaatccaccaccactgccg agcagtcaagcgtatccgccgccgccgccgccgccgcagaaggtcacatcgccgccgccgccgcagaagtacactccgcc gccgctgccgcagcagcagatttttgtttttaaacatcccttaacagccaatgtatcgggtcctacggcatgcgggaagg cttattttgtcaaaaccttactgaaacgatgtatcaagacgatatcaccttatcctgagagaattatttggttgtataaa cgatggcagcctctctatgacgaaattaaagctacggtgtatccccgagtcgaattcatacaaggcattcccttggaaat ggaacaggatacttttattcatcctagcaagcggaacttggtcattttagatgatctaatgtcatcgtcggccaaagacc ctcggatcaatgagttatttacatgtatccaggaaattcctcaacatctcatgcgtcattttaaggatgctacttcgaag ccttatgggtatttggtcattgacctgaaacctttcacagccgaacatcaacgcctacgcacagatatatttgaccaatc ggatgatcagaaggacccaacatgtcacttcgaagaccacacggatcagataaataaggatgatcagaaggacatggatt attctgaacacatctctgctatcgatcagacgtgttttgaggaagagaaaatgcattcctgtgacgactgtggtctcgtc tttgaaaacatacacgatttacaaaggcatgtcaaaacatggtgtccagaaaacagaaaaagaaagcatgacgaagacga ttacacaatccataagaagatgagattaggcgatgtctcatccgaagaagataatgactcagcagaagaagatgatgatg atggatttgatttcatcgttaacgaagtatgggatgatcacagcacacaatatgatcgcaaaatcaagcaacacatggga gatgacatgtcgaagaaggatgccaaagaagaggctagcgatatcatattatcaaaagaccgatcccttttcatgaagaa atataaagattttctcatgcatatgcatgaattaaatgctagcagactccacagaatgatcaaacaggagataatagaac tggttgcagatcacgacgtgcatatagaccaggccatcgaacaagtgatcaagcgtcacagaactgattttgactccctt ttcgaaaactacgatgagtgcgatgacgcagatgacagtgaagataatacggataccgaatacaatgatgaatga |
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Protein
| Protein ID | pfu_aug1.0_3224.1_23251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3224.1_23251.t1 MSSEEDKWLRFTDVSTQLKVPFVVYADFECILEKIYGCQPDASKSSTVKLAKHKPSGFTYKVVGLNKDLVEDHVTYRGPD AADVFIDHMVVLEERPIHVVRNSKPMELTDDDFESFQKATHCSICGGELGGDVARDHCHLTGKFRGAAHISCNLNYXIHV VRNSKPMELTDDDFESFQKATHCSICGGELGGDVARDHCHLTGKFRGAAHISCNLNYKLRERISVFFHNLRGYDAHLIME SIGKVKNRRLNCIPQNHEKYIFFSLGRIEFIDTFQFLSTSLQKLAALKMTDVALELFTDPDMHLFIEKELLKDLGMKATK CSKLLPNLHDKQNYVLHYRNLQLYLSLGMKLKKIHRVLSFQQSPWLKPYIDFNTNMRKEAKNEFEKDFYKLTNNSVFGKT MENLRKRVDIQLVNQEKRLLKLTKKPGFKSFKIFNEDLVSIELQKAKLVLNRPIYVGFSILDLSKVLMYDLHYNYIKHKY GNAAQLLFTDTDSLCYDIKTDDIFNDMAEDKHLFDFSGYKKDHPLYDANNKKVIASQELQSSQAYTPPPPRSQANPPPLP SSQAYPPPPPPPQKVTSPPPPQKYTPPPLPQQQIFVFKHPLTANVSGPTACGKAYFVKTLLKRCIKTISPYPERIIWLYK RWQPLYDEIKATVYPRVEFIQGIPLEMEQDTFIHPSKRNLVILDDLMSSSAKDPRINELFTCIQEIPQHLMRHFKDATSK PYGYLVIDLKPFTAEHQRLRTDIFDQSDDQKDPTCHFEDHTDQINKDDQKDMDYSEHISAIDQTCFEEEKMHSCDDCGLV FENIHDLQRHVKTWCPENRKRKHDEDDYTIHKKMRLGDVSSEEDNDSAEEDDDDGFDFIVNEVWDDHSTQYDRKIKQHMG DDMSKKDAKEEASDIILSKDRSLFMKKYKDFLMHMHELNASRLHRMIKQEIIELVADHDVHIDQAIEQVIKRHRTDFDSL FENYDECDDADDSEDNTDTEYNDE |
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