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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_316.1_58069
Locus scaffold316.1 : 20266 ... 24621 : +
To GenomeBrowser scaffold316.1:20266..24621
Genes list of scaffold scaffold316.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_316.1_58069.t1 1 1 GPP34 8 167 4.5e-36 124.8 7.29999e-40 5.4e-36 124.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_316.1_58069.t1 gi|321478366|gb|EFX89323.1| hypothetical protein DAPPUDRAFT_220453 [Daphnia pulex] 0.0

Transcript
Transcript IDpfu_aug1.0_316.1_58069.t1
Definition-
>pfu_aug1.0_316.1_58069.t1
atgcgtcgtaggagtctccttaacaggaaggtcatgttacgcaatgccaatcctacaggagatgttcttctagatgaagc
attgaaacacatcaaagaaactgaacctgtagaaaccgtacagagctgggtcgagtacctaagtggtgaaacatggaacc
ccttaaaactacgataccagcttagaaatgtaagagaaagacttgcaaaaaacttggtcgaaaaaggtgtgtgctctaca
gaaaaacaaaactttttattattcgacatgacaacacatccgttaaccgacccagggataaaacagaaactcataaagaa
ggttcaagactctgttctaagtcgatggaccaatgatgcacataggatggacaggcggttactgtccctgatatatctgg
ctcacgcttcagacgtcctggaaaatgccttcgctcctctctctgatgatgactatgaagttgccatgaaaagagtgcga
gagttactggacttggattttgatacagagagcatgaaagaagggacaaacgaactgatgtgggctgttatagcggcatt
tagcaaataa

Protein
Protein IDpfu_aug1.0_316.1_58069.t1
Definition-
>pfu_aug1.0_316.1_58069.t1
MRRRSLLNRKVMLRNANPTGDVLLDEALKHIKETEPVETVQSWVEYLSGETWNPLKLRYQLRNVRERLAKNLVEKGVCST
EKQNFLLFDMTTHPLTDPGIKQKLIKKVQDSVLSRWTNDAHRMDRRLLSLIYLAHASDVLENAFAPLSDDDYEVAMKRVR
ELLDLDFDTESMKEGTNELMWAVIAAFSK

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