Gene
| Gene Model ID | pfu_aug1.0_3149.1_37521 |
|---|---|
| Locus | scaffold3149.1 : 15636 ... 45779 : + |
| To GenomeBrowser | scaffold3149.1:15636..45779 |
| Genes list of scaffold | scaffold3149.1 |
| Synonym | pfu_aug2.0_770.1_01118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3149.1_37521.t1 | 2 | 1 | F-box | 177 | 220 | 1.6e-06 | 27.5 | 8.7e-10 | 1.6e-06 | 27.5 |
| pfu_aug1.0_3149.1_37521.t1 | 1 | 1 | F-box-like | 182 | 222 | 2.2e-11 | 43.2 | 1.2e-14 | 2.2e-11 | 43.2 |
| pfu_aug1.0_3149.1_37521.t1 | 4 | 1 | LRR_8 | 252 | 311 | 1.3e-09 | 37.6 | 0.00051 | 0.94 | 9.2 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 1 | LRR_1 | 252 | 264 | 4.3e-09 | 35.1 | 0.17 | 320.0 | 2.0 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 1 | LRR_6 | 253 | 268 | 3.0e-15 | 54.5 | 0.68 | 1300.0 | 0.0 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 2 | LRR_6 | 274 | 292 | 3.0e-15 | 54.5 | 0.35 | 660.0 | 0.9 |
| pfu_aug1.0_3149.1_37521.t1 | 5 | 1 | LRR_4 | 275 | 314 | 9.7e-13 | 47.4 | 0.00019 | 0.36 | 10.5 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 2 | LRR_1 | 277 | 290 | 4.3e-09 | 35.1 | 0.11 | 200.0 | 2.6 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 3 | LRR_1 | 302 | 318 | 4.3e-09 | 35.1 | 0.025 | 46.0 | 4.6 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 3 | LRR_6 | 337 | 357 | 3.0e-15 | 54.5 | 0.23 | 430.0 | 1.5 |
| pfu_aug1.0_3149.1_37521.t1 | 5 | 2 | LRR_4 | 337 | 371 | 9.7e-13 | 47.4 | 0.025 | 47.0 | 3.7 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 4 | LRR_1 | 337 | 349 | 4.3e-09 | 35.1 | 0.43 | 800.0 | 0.8 |
| pfu_aug1.0_3149.1_37521.t1 | 4 | 2 | LRR_8 | 359 | 369 | 1.3e-09 | 37.6 | 0.063 | 120.0 | 2.5 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 4 | LRR_6 | 360 | 384 | 3.0e-15 | 54.5 | 0.0003 | 0.56 | 10.4 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 5 | LRR_1 | 362 | 375 | 4.3e-09 | 35.1 | 0.0096 | 18.0 | 5.8 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 5 | LRR_6 | 386 | 410 | 3.0e-15 | 54.5 | 4.2e-05 | 0.078 | 13.0 |
| pfu_aug1.0_3149.1_37521.t1 | 5 | 3 | LRR_4 | 389 | 423 | 9.7e-13 | 47.4 | 0.0009 | 1.7 | 8.3 |
| pfu_aug1.0_3149.1_37521.t1 | 4 | 3 | LRR_8 | 389 | 449 | 1.3e-09 | 37.6 | 0.00014 | 0.26 | 11.0 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 6 | LRR_1 | 389 | 408 | 4.3e-09 | 35.1 | 0.022 | 40.0 | 4.7 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 6 | LRR_6 | 414 | 432 | 3.0e-15 | 54.5 | 0.34 | 640.0 | 1.0 |
| pfu_aug1.0_3149.1_37521.t1 | 5 | 4 | LRR_4 | 414 | 454 | 9.7e-13 | 47.4 | 0.00012 | 0.21 | 11.2 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 7 | LRR_1 | 414 | 429 | 4.3e-09 | 35.1 | 0.34 | 630.0 | 1.1 |
| pfu_aug1.0_3149.1_37521.t1 | 2 | 2 | F-box | 431 | 443 | 1.6e-06 | 27.5 | 0.39 | 720.0 | 0.0 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 7 | LRR_6 | 438 | 461 | 3.0e-15 | 54.5 | 0.041 | 76.0 | 3.8 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 8 | LRR_1 | 440 | 451 | 4.3e-09 | 35.1 | 0.035 | 64.0 | 4.1 |
| pfu_aug1.0_3149.1_37521.t1 | 8 | 8 | LRR_6 | 464 | 484 | 3.0e-15 | 54.5 | 1.3e-06 | 0.0023 | 17.7 |
| pfu_aug1.0_3149.1_37521.t1 | 5 | 5 | LRR_4 | 466 | 514 | 9.7e-13 | 47.4 | 0.0001 | 0.18 | 11.4 |
| pfu_aug1.0_3149.1_37521.t1 | 4 | 4 | LRR_8 | 466 | 502 | 1.3e-09 | 37.6 | 0.00032 | 0.59 | 9.9 |
| pfu_aug1.0_3149.1_37521.t1 | 9 | 9 | LRR_1 | 467 | 482 | 4.3e-09 | 35.1 | 0.31 | 570.0 | 1.2 |
| pfu_aug1.0_3149.1_37521.t1 | 2 | 1 | p450 | 501 | 562 | 1.2e-38 | 132.9 | 4.1e-09 | 7.5e-06 | 24.7 |
| pfu_aug1.0_3149.1_37521.t1 | 2 | 2 | p450 | 564 | 664 | 1.2e-38 | 132.9 | 3.8e-34 | 7.0e-31 | 107.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3149.1_37521.t1 | gi|126321061|ref|XP_001373248.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3149.1_37521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3149.1_37521.t1 atgaaaaattcctgccaggtcaacgattctgcgcacgactcttcttccggttttgcgtcagatgttccaagttatacata ttccgggaccagcatgtccacttttaagggcaaactatccgattctgacgacacttcctctgacaagaagaagccgcctc catggccgggaaacacaacaacgcatgcgtataagaagccaaatcactacaatgcgcatgacttgaatatgccataccgg atgtcaactccttctccttgctcataccgttcatcatcatccctgggtacaccgtcattaggtaccaccccatcgtccat ttcaaataaatcatcaaccaagtcaccgtacacaaacaataataatatccctacgcctagtccagtcatcagttataaaa accccgcgtatgaatatcaactcgacaaacatatggagcaaattcaatacaatctaaaacgaattgaactccaagacacg gacaaacttttgtcgaagggatcatacagacatcacaagccttcgctgtttgacctccttacggatgacgtcattgtgaa aatattttccaatctgccatcagaccagttatgtaggtcatcgcgcgtgtgcgaacgatggtacagactcgtttgggatc cgatgctatggaaacgcattgtcatcaacagtgaaaaaataaatgtggacaaagctttgaagtatctcacaaagcgacta tcgtacaatactccaacagtctgtgttatcgttgaacgaattaacttgaacggatgtgagaaactgaccaataaggggtt acacaccgtggcaaagcgctgcccggaattacgtcatctggagatacagggttgctcaaacgtaactaaccaatctctgt acgaggtggtgtcgtactgtgtcaacttagaacttttggatgttacaggttgcccatgcgtcacgtgcatcagtctcaca gatcgtgtcttacagacggcaacggcgcatcacctccgacaagtctacctccgcattctggatatgacggattgctacgc gctggaggacgagggactcggagtgatagcatctcactgttcacagcttcagtatctatacctccgaaggtgtgtccgaa taggagaccctgggatccaatatgtcgccaattattgttcgttcttgaaagaactgagtatcagtgattgtcggaaaatc acagactatggaatttgtgaactggcaaaactcggtgataacttgcgatatcttagtatcgccaaatgtgataaagtttc agacgttgggattattcagctgacgaaatgctgccggaagttacgatatttgaacatgcgcggttgcgaagcagtgtcag acgattcgatggacgtgttagccagacattgtagcaaaattaagtcgctagatattggaaaatgtgatattacggacgaa gggctgcaagttgttgcacaaaactgcccacagctcaagaaactaagtctcaaatcatgacaaattgatctatcgaacga aatttctacattcaatcaacttcgaaaaatttacggtgatgttttctgttacgtcatgggttcgcagccaacaatagtga tcaatgggttaacagctattcaagatcttattgtgaaaaagggagatgcgtttacggacaggccagaaaggtccatcgtg cgcagaatgaataatggcttagtgacatggaatgattataagatacctcatggtgcaatggtattgataaaccttgaatc cgtagctaaagatccaaatacatttcaggatccagaatcatttgacccaaatcggtttttaaatgatgacggaacatttg aaacgaataaattaatttttccattttctgctggaaaaagaagctgtcttggagagggaatagctcgtatgcagctgttt ttgtttcttacatcattaatacaacgatttgaaattcttccagaggaagaatggaaattaccatccactgattctatttt gtttgcaacacgattcccaaaacagttcaaggcccgttttgttgatatcgagtag |
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Protein
| Protein ID | pfu_aug1.0_3149.1_37521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3149.1_37521.t1 MKNSCQVNDSAHDSSSGFASDVPSYTYSGTSMSTFKGKLSDSDDTSSDKKKPPPWPGNTTTHAYKKPNHYNAHDLNMPYR MSTPSPCSYRSSSSLGTPSLGTTPSSISNKSSTKSPYTNNNNIPTPSPVISYKNPAYEYQLDKHMEQIQYNLKRIELQDT DKLLSKGSYRHHKPSLFDLLTDDVIVKIFSNLPSDQLCRSSRVCERWYRLVWDPMLWKRIVINSEKINVDKALKYLTKRL SYNTPTVCVIVERINLNGCEKLTNKGLHTVAKRCPELRHLEIQGCSNVTNQSLYEVVSYCVNLELLDVTGCPCVTCISLT DRVLQTATAHHLRQVYLRILDMTDCYALEDEGLGVIASHCSQLQYLYLRRCVRIGDPGIQYVANYCSFLKELSISDCRKI TDYGICELAKLGDNLRYLSIAKCDKVSDVGIIQLTKCCRKLRYLNMRGCEAVSDDSMDVLARHCSKIKSLDIGKCDITDE GLQVVAQNCPQLKKLSLKSXQIDLSNEISTFNQLRKIYGDVFCYVMGSQPTIVINGLTAIQDLIVKKGDAFTDRPERSIV RRMNNGLVTWNDYKIPHGAMVLINLESVAKDPNTFQDPESFDPNRFLNDDGTFETNKLIFPFSAGKRSCLGEGIARMQLF LFLTSLIQRFEILPEEEWKLPSTDSILFATRFPKQFKARFVDIE |
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