Gene
| Gene Model ID | pfu_aug1.0_312.1_50785 |
|---|---|
| Locus | scaffold312.1 : 11710 ... 17205 : - |
| To GenomeBrowser | scaffold312.1:11710..17205 |
| Genes list of scaffold | scaffold312.1 |
| Synonym | pfu_aug2.0_10562.1_09776 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_312.1_50785.t1 | 1 | 1 | Homeobox | 138 | 195 | 5.6e-11 | 41.8 | 3.1e-14 | 1.2e-10 | 40.8 |
| pfu_aug1.0_312.1_50785.t1 | 1 | 1 | Homeobox_KN | 154 | 193 | 3.3e-10 | 39.5 | 2.0e-13 | 7.3e-10 | 38.3 |
| pfu_aug1.0_312.1_50785.t1 | 1 | 1 | Homez | 166 | 193 | 8.0e-06 | 24.8 | 4.5e-09 | 1.7e-05 | 23.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_312.1_50785.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_312.1_50785.t1 atggaacagagtactttatacatttatcatgcctcgtacaaatttcagccaatgacgtcgcagtacggtcaagtgatgtc ctaccttgacaccgaggtgtatataaagtatcaaccaagttcttcagcaccgacctcaactaccaggccaccaactcagt actcagcacctactcagtacccagctgccactcactccgcgtctactcagtattcagcaacaactcagagccaatatcca gtacctactccgacccactactcagcgcctactcagacccactactcagcaccaacccagacccagtactcagtgcctac tcaatatccaatggtcaactactcagcacctaccaaccctcagacgccaactcagacgcactccaaggatgcacccttca aactcaacctgcgcaccagacccagcctctcccagcgttctattcgcctgatggaagtatggtaccacgcccacatcgac catccgtaccccgacacccaggacgtcgagaccctagcaaccgccggcaacatcaccgaagagcaggtcaagaagtggtt cgccaacaaacgcaacaggagccgcaacatccgcccgatgtcccagatagtgcgccgcaagagacagatccaggccgccg ccaccggcaaccgtatcatccgggtacccagcttgtgttag |
|
Protein
| Protein ID | pfu_aug1.0_312.1_50785.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_312.1_50785.t1 MEQSTLYIYHASYKFQPMTSQYGQVMSYLDTEVYIKYQPSSSAPTSTTRPPTQYSAPTQYPAATHSASTQYSATTQSQYP VPTPTHYSAPTQTHYSAPTQTQYSVPTQYPMVNYSAPTNPQTPTQTHSKDAPFKLNLRTRPSLSQRSIRLMEVWYHAHID HPYPDTQDVETLATAGNITEEQVKKWFANKRNRSRNIRPMSQIVRRKRQIQAAATGNRIIRVPSLC |
|