Gene
| Gene Model ID | pfu_aug1.0_3076.1_08522 |
|---|---|
| Locus | scaffold3076.1 : 17320 ... 30565 : - |
| To GenomeBrowser | scaffold3076.1:17320..30565 |
| Genes list of scaffold | scaffold3076.1 |
| Synonym | pfu_aug2.0_1167.1_24742 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3076.1_08522.t1 | 1 | 1 | Fz | 22 | 157 | 2.1e-11 | 44.1 | 1.6e-14 | 4.6e-11 | 43.0 |
| pfu_aug1.0_3076.1_08522.t1 | 1 | 1 | Pkinase_Tyr | 270 | 544 | 0.0 | 309.2 | 0.0 | 0.0 | 308.8 |
| pfu_aug1.0_3076.1_08522.t1 | 1 | 1 | Pkinase | 271 | 541 | 4.34403e-44 | 150.6 | 0.0 | 6.44597e-44 | 150.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3076.1_08522.t1 | gi|344271507|ref|XP_003407579.1| | PREDICTED: muscle, skeletal receptor tyrosine-protein kinase isoform X4 [Loxodonta africana] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3076.1_08522.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3076.1_08522.t1 atgtcaaatgtaaaaacgacattacttaccattcaagaattacttgaatcaccttttggaatatgcgccccctacaacgg aagtatatgtagtaaaatcctgggccagcgtgtggtgtactacaacacatcgtacagcaatcccgcacaggaacaggaaa tcatggtcagacatctcttagaccgaattaactcagccaccatcatggagagccactgcggtgtaccagcgctcaaaatt ttctgtcaccaagcatatccaggctgcgaagaggtcaaagggcaaaacgactacaatgtcaagatcaaaccgttgtgcag ggagagttgtttggcagtgaaggatctgttatgttttaaccagtggatcgaggtagctaacaggatcaacctgcgtaacc ccgcccatcactatcatttgccggactgtgccgccctgcccagtaagacggacaatgacacacagtgtacggacgccaat ctcttctacagggacgcatcactagtcagcaccacggccgtaaaccctgtaatgcaggagcctgtagagaagtcggtggg tgtgattgccaaggtcatcattgccgttgtcagtatcgtgggtgtttttgtggtggccctcatcgcctgcctgtgttacc agatcatcaagcagcgccgcaatgttcgctataacaccacgccacaagatgatattgacattgatattgacaagcttcct acaaatatctcctaccatcgggtcactgatagcaccaaaatgaaccccaaactggaatgtctggaatatccgcggaatga cattgtctacataagggacattggacagggagcttttgggcgtgtgtttaaggcaaaggcgccaaatttgaaaaataaag gagaggatgtaatgatagcagtgaaaatgctgaaagaggacgccactgaggatctacagttagactttgagcgggaagcg tccttaatggcggattttgaacatccaaatattgtaaaacttgttgggatttgtgcaattggtaaaccaatgtgtctgtt atttgaattcatgaacaaaggtgatttgaatgaattcttaagactaaacagttcagaaaattacataatcagaagacata gtattgacatttattcagagaggatacccaccataacaaccaaagatcagctatttatggcgcttcaagtcgcgtgtggg atggtgtatctctcagaacgaggctttgttcacagggatttggccacgcgcaactgtctcgttggtgatgctttaactgt gaaaatagctgactttggtctagcaagaagtgttcattctttagattattaccgagggagtgagcacgatgctataccta tacgctggatgccaccagagtccatactctataacaagtttacagtagaatcagacgtttggtcgtttggtgtactgttg tgggagattttctccttcgcgttacagccgtattacggactgacacacgaagaagtcgtacagtttatcaaagacggtaa agtcctggcttgtccagagaaaacacccaaacaaatatatgatctgatgaaactgtgctggagccgtaaaccttcccatc gtccgtgcttccagatgttacataaaactcttgtctccatacacagcgactatccaaaacacaggatcatgagtgaagct gtattatag |
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Protein
| Protein ID | pfu_aug1.0_3076.1_08522.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3076.1_08522.t1 MSNVKTTLLTIQELLESPFGICAPYNGSICSKILGQRVVYYNTSYSNPAQEQEIMVRHLLDRINSATIMESHCGVPALKI FCHQAYPGCEEVKGQNDYNVKIKPLCRESCLAVKDLLCFNQWIEVANRINLRNPAHHYHLPDCAALPSKTDNDTQCTDAN LFYRDASLVSTTAVNPVMQEPVEKSVGVIAKVIIAVVSIVGVFVVALIACLCYQIIKQRRNVRYNTTPQDDIDIDIDKLP TNISYHRVTDSTKMNPKLECLEYPRNDIVYIRDIGQGAFGRVFKAKAPNLKNKGEDVMIAVKMLKEDATEDLQLDFEREA SLMADFEHPNIVKLVGICAIGKPMCLLFEFMNKGDLNEFLRLNSSENYIIRRHSIDIYSERIPTITTKDQLFMALQVACG MVYLSERGFVHRDLATRNCLVGDALTVKIADFGLARSVHSLDYYRGSEHDAIPIRWMPPESILYNKFTVESDVWSFGVLL WEIFSFALQPYYGLTHEEVVQFIKDGKVLACPEKTPKQIYDLMKLCWSRKPSHRPCFQMLHKTLVSIHSDYPKHRIMSEA VL |
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