Gene
| Gene Model ID | pfu_aug1.0_3076.1_08521 |
|---|---|
| Locus | scaffold3076.1 : 6606 ... 10627 : + |
| To GenomeBrowser | scaffold3076.1:6606..10627 |
| Genes list of scaffold | scaffold3076.1 |
| Synonym | pfu_aug2.0_1167.1_24741 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3076.1_08521.t1 | 1 | 1 | DUF2372 | 39 | 121 | 3.3e-21 | 75.1 | 3.2e-25 | 4.8e-21 | 74.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3076.1_08521.t1 | gi|260806585|ref|XP_002598164.1| | hypothetical protein BRAFLDRAFT_123313 [Branchiostoma floridae] | 5.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3076.1_08521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3076.1_08521.t1 atgaataacgttcaacaaaacacagattcacccttgaaaacaaaacaaattacagtctgtgtagaaggatacaacacaaa cctcctttgcagccatttcgaggatagacttttcatcattgtcacacagtacaacaaaattggaaccttggtggaggtga ccagagacgtcgtgttggaggagatgtcggcatcacgaccatcttactcatccagagtccttctgggagttgatgagcct cttacccatgttatagccaagaacctactgtctaaactagattctaccaaaccagttctcctttccatgtcactgaaaga cacgtccccgaagacagtacaggggctaagtgaagctgtgaagggcgtggtgggatag |
|
Protein
| Protein ID | pfu_aug1.0_3076.1_08521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3076.1_08521.t1 MNNVQQNTDSPLKTKQITVCVEGYNTNLLCSHFEDRLFIIVTQYNKIGTLVEVTRDVVLEEMSASRPSYSSRVLLGVDEP LTHVIAKNLLSKLDSTKPVLLSMSLKDTSPKTVQGLSEAVKGVVG |
|