Gene
Gene Model ID | pfu_aug1.0_3020.1_66549 |
---|---|
Locus | scaffold3020.1 : 1 ... 16824 : + |
To GenomeBrowser | scaffold3020.1:1..16824 |
Genes list of scaffold | scaffold3020.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3020.1_66549.t1 | 1 | 1 | A2M | 7 | 70 | 7.8e-10 | 38.1 | 1.3e-13 | 2.0e-09 | 36.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
Dshape | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_3020.1_66549.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3020.1_66549.t1 aaccagagtatcaactgaccgttcttacagagttcctctaacatacaccacgtgggaagtcagcgccatgtcgttggaca aaacaaaacaaacgccatctaaagctgagttaaaggtaacatcacctttccatataagacttcaacttccaaattcagcg aaggccatggagcctacaatgttagctgctactgttatcaacaacctcccttacgatgctgagcctccaggaaaacaggt tatgaagacgtggcaacggttagttaaccagaaggaaggggaatcaaataatgatgtcatagacacaagggatcctgaaa ttatgggctacaatactaccaggcttatcattactgctcgaggtgacgtcatcggtccttcgataaatgaggtggcaaat aaagtgcccggattatatggcgccaggacggactcagctgatacagaaacggtagtaaagacaattggacccagacttct tctgtctaaatattatgaggcgatgaggatgaagaattacggcaaggacaactatactgaagacgtgtgccctgtaaatg gaggttcaggcgagggacccgttgagctgacagcgtacgtcactggtatacttgtcgatactccatgcttgacgcttctg cagcttctgacgttgtattcaggaataggtcaggatattgacacctctatgatgaaccttgacatccgggtatcaagtca aactgcaggtcaacctttcacacacaacttcagaattacacctgaaaatactttacttttgcagtctgtacaagtaccaa aagacgtgaagcaaattcagctgacatcgaggggaccaggtatagctcttgttgaggttgaacattatcacagtgagcct caggatccccatacaacattagatgtggcattggcgaatgaaacagctatgagctatactgtggtcatctgcccaagcct gatagaagagattcgtgcattccagtgcgttttttccttggcacaaagacgcgacatattccagcaaaacaaccctccag agttatgctctacacaaagaataataagaataagaagattacaaagttcttccagtccgccatcggtaaaatga |
Protein
Protein ID | pfu_aug1.0_3020.1_66549.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3020.1_66549.t1 TRVSTDRSYRVPLTYTTWEVSAMSLDKTKQTPSKAELKVTSPFHIRLQLPNSAKAMEPTMLAATVINNLPYDAEPPGKQV MKTWQRLVNQKEGESNNDVIDTRDPEIMGYNTTRLIITARGDVIGPSINEVANKVPGLYGARTDSADTETVVKTIGPRLL LSKYYEAMRMKNYGKDNYTEDVCPVNGGSGEGPVELTAYVTGILVDTPCLTLLQLLTLYSGIGQDIDTSMMNLDIRVSSQ TAGQPFTHNFRITPENTLLLQSVQVPKDVKQIQLTSRGPGIALVEVEHYHSEPQDPHTTLDVALANETAMSYTVVICPSL IEEIRAFQCVFSLAQRRDIFQQNNPPELCSTQRIIRIRRLQSSSSPPSVK |