Gene
| Gene Model ID | pfu_aug1.0_30082.1_26507 |
|---|---|
| Locus | scaffold30082.1 : 1 ... 12361 : + |
| To GenomeBrowser | scaffold30082.1:1..12361 |
| Genes list of scaffold | scaffold30082.1 |
| Synonym | pfu_aug2.0_182.1_07118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_30082.1_26507.t1 | 2 | 1 | TSP_1 | 75 | 83 | 1.5e-11 | 44.1 | 0.46 | 3400.0 | -1.8 |
| pfu_aug1.0_30082.1_26507.t1 | 2 | 2 | TSP_1 | 111 | 159 | 1.5e-11 | 44.1 | 2.0e-15 | 1.5e-11 | 44.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_30082.1_26507.t1 | gi|242025488|ref|XP_002433156.1| | f-spondin, putative [Pediculus humanus corporis] | 7.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_30082.1_26507.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30082.1_26507.t1 agctactgtcatatctgaacacccaaacatctggttcaaagactcaggtgacctgacacggagaatatgcaaacaggcga gccttaaagctcataatgaagtcatagacgccaattttgatacaattgaagtgaagatgaagtcacgtataggtatggac ggacgggacgaccccaccgcccatctaaatatagataaactcaataaaatgaaacaaaagataaagagaaaaaagaaccg gaagaacaaaaagaggaagaggctccggaagttgcgcagacgtggtaaatatgatccaagtaaaggaccacgtgttgact gtgtgataacaagttggtctgagtggtcgccgtgctccgtgtcttgtggtagaggatttatttcaaagacaaggacggtc aaagttcaagggtcaaatgggggtattcgttgtccgaggaagttgatgaaaaagaagaagtgtaaaatggagaaatgtcg taagtatttgcttcatatgaaatttaaagaaaaagatgctggtgaaatttga |
|
Protein
| Protein ID | pfu_aug1.0_30082.1_26507.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_30082.1_26507.t1 ATVISEHPNIWFKDSGDLTRRICKQASLKAHNEVIDANFDTIEVKMKSRIGMDGRDDPTAHLNIDKLNKMKQKIKRKKNR KNKKRKRLRKLRRRGKYDPSKGPRVDCVITSWSEWSPCSVSCGRGFISKTRTVKVQGSNGGIRCPRKLMKKKKCKMEKCR KYLLHMKFKEKDAGEI |
|