Gene
| Gene Model ID | pfu_aug1.0_3000.1_66546 |
|---|---|
| Locus | scaffold3000.1 : 15513 ... 35935 : - |
| To GenomeBrowser | scaffold3000.1:15513..35935 |
| Genes list of scaffold | scaffold3000.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3000.1_66546.t1 | 1 | 1 | RRM_5 | 19 | 68 | 3.1e-08 | 33.3 | 1.9e-11 | 5.7e-08 | 32.4 |
| pfu_aug1.0_3000.1_66546.t1 | 1 | 1 | RRM_6 | 20 | 65 | 1.2e-08 | 34.8 | 6.8e-12 | 2.0e-08 | 34.0 |
| pfu_aug1.0_3000.1_66546.t1 | 1 | 1 | RRM_1 | 21 | 65 | 5.9e-08 | 32.2 | 3.7e-11 | 1.1e-07 | 31.3 |
| pfu_aug1.0_3000.1_66546.t1 | 1 | 1 | zf-CCHC | 89 | 105 | 3.8e-06 | 26.5 | 2.3e-09 | 6.9e-06 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3000.1_66546.t1 | gi|242015115|ref|XP_002428219.1| | RNA recognition motif containing protein, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3000.1_66546.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3000.1_66546.t1 atgaaaactttcacattcggtgattgtctcgatgtacatattgatgtacatacatgtatcagagtaaccattgccaaaga taagcatagtcacagaagtaaaggagtggcattcatattgtttgtggagagagattcagcatacaaagctgtaagggctc tcaatggaactgtgatgtttggaaggacaattaaatgcagcattgcaaaggacaatggaaggactacagaattcatcagg aggaaaaattatccagataaatctaaatgctatgaatgtggtgaagaaggccatatgagttataattgtcctaaaaactt actcggtgatagggagccgccacccaaaaaagagaaaaagaggaaaaagacagatgatgatcaagaggatgaggaagttg attcagacagtgatgaggcaacagaagatcccgctctagacagtcttgctgcagccattaattatcagagagcacaaatg gaaagagacgctagcaggtatggtgaaagcagttctttcttacccgaactactggaagaaccaaagcgcaaaaagtacaa aaaagacgcttattttagtgatgaagaagaaattgctgatgattaa |
|
Protein
| Protein ID | pfu_aug1.0_3000.1_66546.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3000.1_66546.t1 MKTFTFGDCLDVHIDVHTCIRVTIAKDKHSHRSKGVAFILFVERDSAYKAVRALNGTVMFGRTIKCSIAKDNGRTTEFIR RKNYPDKSKCYECGEEGHMSYNCPKNLLGDREPPPKKEKKRKKTDDDQEDEEVDSDSDEATEDPALDSLAAAINYQRAQM ERDASRYGESSSFLPELLEEPKRKKYKKDAYFSDEEEIADD |
|