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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3000.1_66544
Locus scaffold3000.1 : 1 ... 8469 : +
To GenomeBrowser scaffold3000.1:1..8469
Genes list of scaffold scaffold3000.1
Synonym pfu_aug2.0_1036.1_21363

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3000.1_66544.t1 gi|291389529|ref|XP_002711366.1| PREDICTED: solute carrier family 35 member E3 [Oryctolagus cuniculus] 2.0e-27

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_3000.1_66544.t1
Definition-
>pfu_aug1.0_3000.1_66544.t1
atctttggaaacaaatacagtgggcacttaccagttgatcaaaacgatgaccacaccaataataatggtcatccaaacta
tgttctatgaaaagtcattctctacgagaatcaaactcactgtgattccaattaccattggagtatttctgaattcctgt
tatgatatgaaatttaattttcttggaattatcttcgcttctattggagtccttgtcacctccctgtatcaagtgttatt
taccaaaggagcaaaattgcgtattttcttaaataaaaaggaagtagagaagaacgcgtttgcgagtcgagatctggttt
caggctccgattttcatcatcacatgcctcgcaatccgagattcgaggcattctgttttaatctgtacgcttgtctgttt
gtccgtttgtactcaaaaacatttaaaagactctggtag

Protein
Protein IDpfu_aug1.0_3000.1_66544.t1
Definition-
>pfu_aug1.0_3000.1_66544.t1
SLETNTVGTYQLIKTMTTPIIMVIQTMFYEKSFSTRIKLTVIPITIGVFLNSCYDMKFNFLGIIFASIGVLVTSLYQVLF
TKGAKLRIFLNKKEVEKNAFASRDLVSGSDFHHHMPRNPRFEAFCFNLYACLFVRLYSKTFKRLW

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