Gene
| Gene Model ID | pfu_aug1.0_29.1_65194 |
|---|---|
| Locus | scaffold29.1 : 128126 ... 131113 : + |
| To GenomeBrowser | scaffold29.1:128126..131113 |
| Genes list of scaffold | scaffold29.1 |
| Synonym | pfu_aug2.0_1100.1_01386 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_29.1_65194.t1 | 2 | 1 | Glyco_transf_11 | 152 | 184 | 2.7e-37 | 128.3 | 0.1 | 1500.0 | -2.2 |
| pfu_aug1.0_29.1_65194.t1 | 2 | 2 | Glyco_transf_11 | 229 | 425 | 2.7e-37 | 128.3 | 3.09995e-41 | 4.7e-37 | 127.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_29.1_65194.t1 | gi|344270085|ref|XP_003406876.1| | PREDICTED: galactoside 2-alpha-L-fucosyltransferase 2-like [Loxodonta africana] | 8.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_29.1_65194.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29.1_65194.t1 atggagtcccgtcgtcacatttatgaagataaagatgaggacccccatcagcaaaagcagcggagggtcaacccgtttgt taagaataaaagaaaaggggaaatatgcaacatgactccattgttgaaaatacagaaaaaagcgaaacctccaaatgcga aaatacgaagtggacaaacgcaacaagggacaacaaagggacaaaacataaacgactacaagaaaatcacagagaccaaa cgtcaaccgatggaaaaagaaaacaaatttatgaaagatatttggttgaatacaatttctcgaatgaaaaggcacaaata cagaactgtttttattatcctggtgatcactattgtcgtcgttatgttaaggaatgaggagattgaagagattgccgtca aactttgtatgaactctgcagtttatactccctcaccagttgcttgcctgaaatatcaaggacgattaggcaatttgcta tttatgtacgccttccactatgcttactcaatgcaaaaagatgtagcgatggtcaaaatcggacagtttgatttagatag tgtgttcattctagaacagggaaaatttgtaactgattcacaatataatgccacatactgtgactgcatacctatcattg aggataaatatgactgtggctttgacatcaatatagcgagtataacgaaaggacagagtgtctcgtttttagggtttttc cagtcatggaggtattggattgactatgaacataaaatacgtggcctttttacctttcgctccgaaatacgaaattctgc agagcgacaattcaaggggatgctgggacatcgtggatggagcgttgaaagggacatctttgtagggatgcatatcaggc gaggagattacgctaataagttcctgatagacttcggccagaagacggcacctttgggctatatcaaaaacgcaatgtca ctcatgaaaaaaatatataaaacagtaagatatgttgttttttcggacgatatcggatggtgtaaacagaatatcaagag aagaaggaaggaaattttctatgtagaagacaacacagccgctgttgatatggccatgatgactttgaccaatcattcaa taataacagccggtacttttgggtggtgggctgcctttctcactaacggtactacaatatactacaaagatctgttcacc agaaatactcgttatgcagagcaattccctgaccaagagacacgggattttttcccgcctctctggattggacttgatag atga |
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Protein
| Protein ID | pfu_aug1.0_29.1_65194.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29.1_65194.t1 MESRRHIYEDKDEDPHQQKQRRVNPFVKNKRKGEICNMTPLLKIQKKAKPPNAKIRSGQTQQGTTKGQNINDYKKITETK RQPMEKENKFMKDIWLNTISRMKRHKYRTVFIILVITIVVVMLRNEEIEEIAVKLCMNSAVYTPSPVACLKYQGRLGNLL FMYAFHYAYSMQKDVAMVKIGQFDLDSVFILEQGKFVTDSQYNATYCDCIPIIEDKYDCGFDINIASITKGQSVSFLGFF QSWRYWIDYEHKIRGLFTFRSEIRNSAERQFKGMLGHRGWSVERDIFVGMHIRRGDYANKFLIDFGQKTAPLGYIKNAMS LMKKIYKTVRYVVFSDDIGWCKQNIKRRRKEIFYVEDNTAAVDMAMMTLTNHSIITAGTFGWWAAFLTNGTTIYYKDLFT RNTRYAEQFPDQETRDFFPPLWIGLDR |
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