Gene
| Gene Model ID | pfu_aug1.0_2890.1_23107 |
|---|---|
| Locus | scaffold2890.1 : 24039 ... 28395 : - |
| To GenomeBrowser | scaffold2890.1:24039..28395 |
| Genes list of scaffold | scaffold2890.1 |
| Synonym | pfu_aug2.0_182.1_07112 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2890.1_23107.t1 | 4 | 1 | EF-hand_6 | 17 | 43 | 5.3e-21 | 72.5 | 1.7e-07 | 0.00032 | 20.3 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 1 | EF-hand_1 | 18 | 42 | 1.5e-26 | 89.6 | 4.8e-08 | 8.9e-05 | 21.5 |
| pfu_aug1.0_2890.1_23107.t1 | 2 | 1 | EF-hand_7 | 20 | 75 | 6.2e-23 | 80.7 | 1.4e-11 | 2.7e-08 | 33.8 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 1 | EF-hand_5 | 23 | 40 | 2.2e-16 | 58.3 | 5.4e-07 | 0.001 | 18.3 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 1 | EF-hand_8 | 25 | 43 | 1.1e-14 | 53.7 | 0.00032 | 0.6 | 9.7 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 2 | EF-hand_6 | 58 | 78 | 5.3e-21 | 72.5 | 0.00011 | 0.21 | 11.5 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 2 | EF-hand_8 | 58 | 76 | 1.1e-14 | 53.7 | 0.00033 | 0.6 | 9.7 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 2 | EF-hand_1 | 59 | 78 | 1.5e-26 | 89.6 | 1.0e-06 | 0.0019 | 17.4 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 2 | EF-hand_5 | 59 | 74 | 2.2e-16 | 58.3 | 0.0027 | 5.1 | 6.6 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 3 | EF-hand_8 | 92 | 122 | 1.1e-14 | 53.7 | 1.1e-06 | 0.002 | 17.6 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 3 | EF-hand_6 | 99 | 121 | 5.3e-21 | 72.5 | 2.1e-07 | 0.00039 | 20.0 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 3 | EF-hand_5 | 99 | 120 | 2.2e-16 | 58.3 | 3.8e-05 | 0.07 | 12.4 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 3 | EF-hand_1 | 100 | 122 | 1.5e-26 | 89.6 | 4.4e-08 | 8.1e-05 | 21.6 |
| pfu_aug1.0_2890.1_23107.t1 | 2 | 2 | EF-hand_7 | 100 | 154 | 6.2e-23 | 80.7 | 3.8e-16 | 7.0e-13 | 48.5 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 4 | EF-hand_8 | 128 | 153 | 1.1e-14 | 53.7 | 6.6e-07 | 0.0012 | 18.3 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 4 | EF-hand_1 | 131 | 156 | 1.5e-26 | 89.6 | 6.5e-11 | 1.2e-07 | 30.4 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 4 | EF-hand_6 | 131 | 156 | 5.3e-21 | 72.5 | 1.0e-07 | 0.00019 | 21.0 |
| pfu_aug1.0_2890.1_23107.t1 | 4 | 4 | EF-hand_5 | 131 | 153 | 2.2e-16 | 58.3 | 8.8e-09 | 1.6e-05 | 23.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2890.1_23107.t1 | gi|221110972|ref|XP_002167811.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2890.1_23107.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2890.1_23107.t1 atggcaaaagcaaccagtttctttgacccttatgcaccgaatgtagttctgaaaagtttgtacctgaagtacgacaaaga tggcagcggaaagttgaacaaagacgaattgacgacactcttcaaggatgatctgggaatgacggacagccagacggaag cttacagtttgctacttgataaagatggcgatgccaatgtatcgtttgaagaatttgtggcatggcttaagagtggagaa aaatttaagaatattgaagatcagtcacgttactacaaacttcagaaagctgttagtctgttcaagaaatatgacacgga tgggagtcaaactctggataatgaagaattcaagaaactcttcgttgaaattagcgggaaaccatcaaagttagaagccg ctttagctgaactggataaggacggaaatgggaaaatttcctttcaggaatttttgaggtggctaaactggataccaatg gagaatttttaa |
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Protein
| Protein ID | pfu_aug1.0_2890.1_23107.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2890.1_23107.t1 MAKATSFFDPYAPNVVLKSLYLKYDKDGSGKLNKDELTTLFKDDLGMTDSQTEAYSLLLDKDGDANVSFEEFVAWLKSGE KFKNIEDQSRYYKLQKAVSLFKKYDTDGSQTLDNEEFKKLFVEISGKPSKLEAALAELDKDGNGKISFQEFLRWLNWIPM ENF |
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