Gene
| Gene Model ID | pfu_aug1.0_2890.1_23106 |
|---|---|
| Locus | scaffold2890.1 : 9606 ... 23712 : + |
| To GenomeBrowser | scaffold2890.1:9606..23712 |
| Genes list of scaffold | scaffold2890.1 |
| Synonym | pfu_aug2.0_182.1_07113 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2890.1_23106.t1 | 2 | 1 | zf-C3HC4_2 | 41 | 84 | 1.2e-06 | 28.4 | 6.3e-10 | 1.2e-06 | 28.4 |
| pfu_aug1.0_2890.1_23106.t1 | 2 | 1 | zf-C3HC4_4 | 41 | 84 | 1.0e-05 | 25.2 | 5.6e-09 | 1.0e-05 | 25.2 |
| pfu_aug1.0_2890.1_23106.t1 | 2 | 2 | zf-C3HC4_2 | 125 | 156 | 1.2e-06 | 28.4 | 0.27 | 490.0 | 0.8 |
| pfu_aug1.0_2890.1_23106.t1 | 2 | 2 | zf-C3HC4_4 | 139 | 152 | 1.0e-05 | 25.2 | 0.58 | 1100.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2890.1_23106.t1 | gi|115625833|ref|XP_788768.2| | 4.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_2890.1_23106.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2890.1_23106.t1 atggccgtcccaatgaagtcgcagtatgatgatcatttgatgtcctaccttgacgccgaagaaaggagcgacataactga aagaatggacagagaagaaaaaccagacgagttgatcatatgtccattgtgccacgacctctttaattctccaaaatcat tactttgtctacatacgttttgtaaagtatgtcttcatacatacatgtcaaaagaattggaaaacaatggaaatgccgtg tgtccagtttgtcattctagcgttggtgatatcaacagagacaagtacgatgattggttgaataatctaccttcaaactt tatggtgaattctctcatggaccgtgaaaaatcgagaactggtaatagaaactgtgaagtttgtgaacagttagaaagag taaatgctgcgacttcgtattgtgtagaatgttgtgaggcgtattgcgatcaatgttcacaaaaccataccgtccttaaa atgctacggaagcatagattgctgccggtagacgaagttcgtatgcatgggatttcctctaccgaagaatttattccaga ctgccttgtccatataaataaaaaacttgaattattctgctttgaccatgagatgccttgctgtatcacttgtatgacta ttcatcaccggggatgccagaatgttcaaacactcgtcgaagctgcaaacatggtgcaaaaagataccaatttcattgct tttactgatcgaatatccaaactaatcaacagtataaaagaacaacttacaagcaatgaaaaaaagggtagagagttaat gtcccaactatccaaggtagaaaatcaggcccagcgaaaaaaggaggaaatgattgcacatattgaggctttatacaaga cgtttgaagaaggaattcaaactataaagaagcagtacgaaagagacgaccaatctgaggtattgtcacacaaaatgcta ctgcttcagaatttcctgaaagctgtcgatacattaaaaccctcatcatcgaacattgcaatcttcctagaatatcaaaa gatgaaaggaaaagaaaatgaagtaagcactttgctggatcaatacatagcaaaaagcagaccagagtccatagaataca tacccagtgagactgccaggaatttcgattctattgtcacttcattaggtgaaaccgaaatacgtgtcatcaaccctttt caacgagcacaggtttccatcaagaaacctaagtcacacaatttgaaagaaatcctcacaatacaagaaaaggatgttcg atttactgatgctgtatttctagactcagacacggtcatttccgtggatgactcgaaaaattgtatctgggcattcaaca taaatggtacatgcatgagccgatcggatttaccttgtagaccttgggctgtgacagtggctggcagctccgacgcagtt atcactcttcgcgagagaagaatgttacaattctttacattccataaaaaatccaagaaactgaacaaaaagcgaacaat tatcctaaaggaagaaccccttggtatcgacttttcccaacaatgcttgttcgtaacattttcacagaaaataatgaagc ttaagctagattga |
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Protein
| Protein ID | pfu_aug1.0_2890.1_23106.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2890.1_23106.t1 MAVPMKSQYDDHLMSYLDAEERSDITERMDREEKPDELIICPLCHDLFNSPKSLLCLHTFCKVCLHTYMSKELENNGNAV CPVCHSSVGDINRDKYDDWLNNLPSNFMVNSLMDREKSRTGNRNCEVCEQLERVNAATSYCVECCEAYCDQCSQNHTVLK MLRKHRLLPVDEVRMHGISSTEEFIPDCLVHINKKLELFCFDHEMPCCITCMTIHHRGCQNVQTLVEAANMVQKDTNFIA FTDRISKLINSIKEQLTSNEKKGRELMSQLSKVENQAQRKKEEMIAHIEALYKTFEEGIQTIKKQYERDDQSEVLSHKML LLQNFLKAVDTLKPSSSNIAIFLEYQKMKGKENEVSTLLDQYIAKSRPESIEYIPSETARNFDSIVTSLGETEIRVINPF QRAQVSIKKPKSHNLKEILTIQEKDVRFTDAVFLDSDTVISVDDSKNCIWAFNINGTCMSRSDLPCRPWAVTVAGSSDAV ITLRERRMLQFFTFHKKSKKLNKKRTIILKEEPLGIDFSQQCLFVTFSQKIMKLKLD |
|