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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_28309.1_40715
Locus scaffold28309.1 : 1 ... 14315 : -
To GenomeBrowser scaffold28309.1:1..14315
Genes list of scaffold scaffold28309.1
Synonym pfu_aug2.0_1103.1_11435

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_28309.1_40715.t1 gi|322802781|gb|EFZ22993.1| hypothetical protein SINV_12469, partial [Solenopsis invicta] 4.0e-39

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_28309.1_40715.t1
Definition-
>pfu_aug1.0_28309.1_40715.t1
gctcagttactctactatatgcgtgtaccgttccgctatttctgcaattcatgatccagttgatggtcataaagtaggag
aacatccacgaatcattgctctactcaaaggggtgtttaataagcaaccgcccaggcgaactttgatacccccatgggat
ttacgtattgtcttacgacacattcagaaccacccatttgaaccaatggagcaagcaagtttaaaactgaaaaccatgaa
agctgtctttttattggcaatcacttcaggcagtagagtaagtgatctgtcattgcttggctgccagcagtctgcaatga
ggacggaaaagtctcctcctggaattcgattcataccatgtggcttaaggaagcaggatagaccaggtcattttgaacat
gaaatattcgttcctaagtacccatataatcttaaattggatccgatgcgtgcaacactaatttacatgaaagccacgga
gacccttcgaggaagtgctaaaagtcttttcattactctcacggagcctcataagactccttctccgcaaactatttcac
actggattgtcaatacaatcaaattgtgttatgacctggacgggaaatcactgcataacatagaggaagtggaggacaca
gggaccgaggaggaggaggagttatccaataatgaggataatgaggatgggtaccagactgactcagagtcaagtggtga
ggagtcagagtcaatggaggatgtgactgctgaggacagggaggtcaatgctaatgttgaagatcctggcatagagatta
agccgctcaacgtgtcagaaattacccagagtacaccagactctatcacatgctccggtaactggaatcaggacccgcat
aaaagtaccatgtggctcggtacagaggatggatgcatccatatattccagtctacagataatattaaaacgacaaagaa
taaactgaaaattcaccatgaatctcccgtatattgtatagtgtatcttgacaataaggtgtttgtatccttagccaatg
gagatcttatagtctacaagagagatgcagaaggagtatgggactcggagaatccctacacacgttctataggcacggct
cagtcacctataacacggatgttagccgtagccggaaaattatggtgtggctgtcagaatgtgataaaagtcattaaccc
cctcactctcagtacagaggaatccaatgaatcattgacagcagcaataaactacacaagaagtaagggagagaactcta
tggcatcagaggccgaggaggagtataaatacctcaaacaaatacaacagagggtgatagacgatcctggtgtggtaagt
gttatagacgaatacaacggagggtacaagacgatcctggtgtg

Protein
Protein IDpfu_aug1.0_28309.1_40715.t1
Definition-
>pfu_aug1.0_28309.1_40715.t1
LSYSTICVYRSAISAIHDPVDGHKVGEHPRIIALLKGVFNKQPPRRTLIPPWDLRIVLRHIQNHPFEPMEQASLKLKTMK
AVFLLAITSGSRVSDLSLLGCQQSAMRTEKSPPGIRFIPCGLRKQDRPGHFEHEIFVPKYPYNLKLDPMRATLIYMKATE
TLRGSAKSLFITLTEPHKTPSPQTISHWIVNTIKLCYDLDGKSLHNIEEVEDTGTEEEEELSNNEDNEDGYQTDSESSGE
ESESMEDVTAEDREVNANVEDPGIEIKPLNVSEITQSTPDSITCSGNWNQDPHKSTMWLGTEDGCIHIFQSTDNIKTTKN
KLKIHHESPVYCIVYLDNKVFVSLANGDLIVYKRDAEGVWDSENPYTRSIGTAQSPITRMLAVAGKLWCGCQNVIKVINP
LTLSTEESNESLTAAINYTRSKGENSMASEAEEEYKYLKQIQQRVIDDPGVVSVIDEYNGGYKTILV

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