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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2803.1_30253
Locus scaffold2803.1 : 35652 ... 37895 : -
To GenomeBrowser scaffold2803.1:35652..37895
Genes list of scaffold scaffold2803.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2803.1_30253.t1 2 1 Cupin_8 12 61 2.4e-31 109.1 6.1e-21 2.3e-17 63.3
pfu_aug1.0_2803.1_30253.t1 2 2 Cupin_8 59 97 2.4e-31 109.1 8.2e-16 3.0e-12 46.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2803.1_30253.t1 gi|156396392|ref|XP_001637377.1| predicted protein [Nematostella vectensis] 2.0e-19

Transcript
Transcript IDpfu_aug1.0_2803.1_30253.t1
Definition-
>pfu_aug1.0_2803.1_30253.t1
atgttcaattggtgctctattgtaccatggatatcaatcgatcctctaaatccagacctagtaaggtaccctgattatgc
caaagcacgtcccatagaggtgacagtaaaggaaggtgaaatcctatacctaccctccctgtggttccatcatgtacggc
aatctcatggatgtatagcagtgcacagagatcactatgagaacttgtactgcgtggtacgaggttggaagacctttata
ctgatcccacctacagatattccatatattccttatgatgattatcagcctgccgtcttcaaggaaaccgatgatggtaa
atttgatattgtcgtcaacgaaaactcagaaaaggtaaattcaattttccgctag

Protein
Protein IDpfu_aug1.0_2803.1_30253.t1
Definition-
>pfu_aug1.0_2803.1_30253.t1
MFNWCSIVPWISIDPLNPDLVRYPDYAKARPIEVTVKEGEILYLPSLWFHHVRQSHGCIAVHRDHYENLYCVVRGWKTFI
LIPPTDIPYIPYDDYQPAVFKETDDGKFDIVVNENSEKVNSIFR

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