Gene
| Gene Model ID | pfu_aug1.0_2722.1_37366 |
|---|---|
| Locus | scaffold2722.1 : 1 ... 20816 : + |
| To GenomeBrowser | scaffold2722.1:1..20816 |
| Genes list of scaffold | scaffold2722.1 |
| Synonym | pfu_aug2.0_2135.1_18700 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2722.1_37366.t1 | 2 | 1 | UvrD_C_2 | 790 | 825 | 1.8e-07 | 31.2 | 1.5e-05 | 0.11 | 12.6 |
| pfu_aug1.0_2722.1_37366.t1 | 2 | 2 | UvrD_C_2 | 875 | 905 | 1.8e-07 | 31.2 | 2.9e-06 | 0.021 | 14.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2722.1_37366.t1 | gi|118086180|ref|XP_418827.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2722.1_37366.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2722.1_37366.t1 gtaattttgccttgctgaatttgttctttgagatgtacggaaaggacccagagaagtactccatgttagaccccagcctg acagactgggagggtaacagtatgttccacatagtggccagggctaaatacaactctaccacacagaaagctacagaact actctgtgataaaaaggtgtctgccttgaggtacaataatgaaggcaaactccccaaggactatctcaacaagaaaaatg atcgtagacttcagttctttcgtttggcatctgttgggagtacagcagagaaaccagcgccaaagaaaaaacaagagaaa aaagtgtctgaatctgaaggtggaacctctaaagaaatagatgatgaagtggcagccattgttaaggaagcagaggagaa taacaacgacaagtcaccaaaacaaccgaaatctcaatcacacatggagaaagctgtcacagagaggaagattgagcgtg tattaccagccaaggcctcccagagacgtgaagccatcagaggtcatatcgaggacatgatatacagcctcccagatatc ccatactctatatttaacccacgacagccagtactgggcgacgataatatgctgaaaaagttgcgacaaaaacgacaaca gtctcaggaagaggctgtcaagaaagagcccgaaaaacaggtacagcctgcaactgttgaatgtgcaggagctaaggtag aagagaagattgaagaggaagaggaaggtgaagaagatgaggatatcatcactgaagaacaagaggagttcacatttgac ccccaggtgtttgacaacatggaatgggaggttgagtgtacagccgatgtatggaggactctgagggacaagcacgtact accggaactcaaacagcgggtcatacgtaagatacagcttctggctaaaggtgaatggagaccgcatctatgtaaggaac taaagaatgtaccagaaacactgaaactgtatgaagctaaactcagcaaaggaggcagaattctatgggagttggctata gctttctctccccgactcagtgagagtgcagagcgtcgtttacagctaggtgatacagacaaggaacagccagtgagggg cggcaggatttactccgaggtcatcagagtgtgggacgttatctttgaccatgataagatctatcgtagtgtgcagcgca tcatcaagtcacatcacagaggggaagaatgtatcatacagaaaaaactaaagggaatcaagcaggagcagttccaggga ggagtgactagaaggatcccaatgattttcacagagacagatgcagggttagatcagagggaggtacaggagtggcaaca agaacttcagaaatacttccctcctgccagctctaacgagacggagtaccacatactcaagttctatgctttctcatcta atctcgtcagtcatgtcttacaaaacttagaaatgaaagtagattttccattccgagtcactgacctggaacatgccatt atcaatctacagtccaatgcacccattcttcttctagatgtagatgaggatgtagaggacttggaggaagaggaggacaa tgtagaaccaacaccaggcagctcagatcaggtggatcctgaggcagagggggaaggaggaggacagatatacgatcacc tacaacaactgttcattaccaagaattccgtgctctgtgctgaggtacagaagaacttccgagagctgagtcacgcctgt gatctggccaaggatcatgttgccatggaaatgcaaggcttaccataccgacttcaagacgtaaacgagtttcaatttcc gctatttattacatctcgccagctactactcatgttagatgcttcactagaacctccctacttcttcaaaagaaatgaag atggaagtatgaggatggangacagtcctctaagttatcatcctttgatggaagatgattcagaagatgaagatgagaaa tttgaagacaatgagatggatgaagatcttgacatagagggcgaagggccacaaaatccagctgcaaagcagaaggtgga tccaagacgggaagtcacatatcaggtgtatcaattaacccacaactaccgatctcatgctgggattctctcccttgcct ccagcatcctcgatttgatgatagagtttttccctgaatcctttgaccggctaggaaaagaccaaggactgttccagggt ccggcacctgtgttactagagtcctgtagcttcagtgatttagccatgctgctgagaggcaacaagaggaaaacgtccca tatagagtttggtgctcaccaggccattcttgtggtcaatgacgcggcccgggaaaacattcccgaggagttacagctag gacttatactgaccatctacgaggccaagggactggagtttgatgacatactactctataatttcttcaatgattcacaa gctaacaaagaatggagagtgataacagagtacttggagagactatacagtacccatacagagaaaacgacaaaggccat gtctgaatccagtctggtggaacttgatgcagaaatccttcagcagtctggacgacctagagctctgacctttgacccta atcaacacaaggttctgaactcggaactgaaacacttgtacacagcagtaactagggctagagttaatgtgtgggttttt gattcacaccttgagaagcgggcaccaatgtttgagtacttcaaggctcggaaactggttagatccattacaagtgagga cgttgaaggagagcaatatgaggaggcatcagatttgtatgcgattcaaggtatgaccaaggaggcgctggagtgtgcaa ggaagtcaggaaacaagtggttgattgggaaatcccttttgattgatgctactctagcagtacgtaaacacgagcttcac cacaatcctgatgctctagagaatatctgccaagatctggaaacagcttttgacttatttcaacaacaagacaggaaaga tgaagccggggaggcatcattactgagagggcaaatcacggggaaaattgttttcctcaagaaggcctttggtgcattca gtaattctattgtcaagaatgaagcaggaatgttagaatgcatggattggatggtaaatcactctgacttgtatgatgac aagagctatgagaatcttagacaggtcattaaaggaatggcaaatctatttgggatccttagagtactaatgaagcaaaa agatgaacaagagcggacaagggaagagaaaattttgagattctatggtttgacatactcaccagataggctcttcttga ttgtctgtccacaacagaagccaatggcactgaaaatgctgagaaaagtaatgtcagagacaaaccgtaagtccatgagg tgtgaaattccacttgagaaagctttgccagaagtctgcaggttcctggtagagaggggacttgaatggaaagtgatcat tgatactgccttgtttaagatcagggagagtaagaggcagtgtcctgactatgcacttggcagaccatgtaggagaggaa ggatgtcagaggacactgaggatcttgtgaccatggagaattgtaccaactttcattctgaattctcctatgaacagcac aacgccctgctggacgcggatgagatgatgatcatgcttgattactatgtacaacatggtgtccatgacctggatttgtt gggcacacaggagatactacaggagctaaatctgcagcgctttgtaccgcggacgtttgaagccaagtacgtctcctgta caaattttatacaagatctcatacctgatcactgctttctgagtgtggctagctgtaatctggcacgagccaaggatctt aaaagctggttcagtaccaggaagagatggttcaaagagttctttgcatcatacctcactgatttctacatggacatgaa aaaggaagagaggggatggaacaccaaattctttgttagatttatgatcctacatcagctaatggatgtaaagatgaagg accagaagccatctagagttatggctaggtttgaaaaagaaatcaaagacgagtttgaaaagaaattccccaatattcgc acactgaggaaaactgttgaaagtcttggattcataactgaagagatggagagaaaactccacattgagtgcctgtctca caggttctatgatgcatttgacaaactctctggtctcaataacgaacctagtgaagcacttattgcattcagtagatatg tcaccatgcttggcaaagtcaaaaagactctactgatgccatactatggtgactttatcatatggcttgagtttttcacc actgttaccatgtctctgattgccaagacttaccatggagacagcttcttcttcgtccttcccgagtcttacatctctac ggtgtattttgttgatgccaccttcatgcaggagcaaggggttcccacgtttgaagcaatccagagatttagaatatgga gaagtttcagatacgaccatttcccacaacgacttggatacatcaccagaatgctgtggtcagaatctggcaatcggaat ctcattaggatgttgttcaaaaccaatgctgaagatggatgtataaaggaaggaaattacggctttgcagagagagttct aacattagcattagtttgcttgtgcaatattggtcacagtatctctgcagataaggagtctgagttcatgaagcagattt acaagatcaagatacgagatagctatcctccaaggctgtgtcgagtattgaacgctgtgcagcaagctcaaagtcagcaa gaagtggcgagtgctttaatggctctactcagggagcgtgagaatgagaagttactttactgtgagtggagaggtggtag agagggcatatggcatgaaccactgcttatcaagcatctcaactcagagttttacaacgacatcactgtttcatacagag ttgatcctttcgttgtggaaggaggtgtagcggaagaggacaatgagccattagtcaatgaggatgatctgctggaagat cttagcatcactatggaggagaaaataaagagagatagacaacagagggaagaggaaatgcaggaaaagcagaaacatgc tgcagggtgtattttgcgctgtacaagatcattcttactcaggattaaggtggcagagaaagggaaattgaagtttctag tagagaaacagctcaacagtgaaaagaagaaactgaagatgaaaatctttgagtcggcagaaatatttgagactcattgt ggggtttgtggtgttccattctttgttcctgaagttaaagtagagagaagctatggtattgattccgaacattccttact ccaaaggcagcaaagtacgtccaatcaaacattagaaaatgaaaccatgattgagcatataaattctataaggcataaag ataaagtaagggattaccagatgttcaggatgaagttctccagacatcttacaaatgaccttgaggagatcacagagttc attcaaaagttcaaactgaatacaaatgccggcagctatcctgatcatgcttatgccattgaccgcatgctgagaaccaa gcaggaagcagatgctgagctccgacgtattgtagatgataaaaactggagcggtaatcaaaagtttgtggaaaagctga aggaaagtaagggggacttccttcaagtaaggtcgtacgtggaggaaactgcaaaggctcatagaaaggagaaagagaga tctaaagctgagttggcatccaagttaccatcacgtgactctcctgagaattgggaggaggagctggtggaggtgatacc cgccgtagatgacccaagcctgcgaaagtctcgtaacaaccctgggaaaggcagagggaggggcaggggtaaaaagaagg aaaacaagtga |
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Protein
| Protein ID | pfu_aug1.0_2722.1_37366.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2722.1_37366.t1 NFALLNLFFEMYGKDPEKYSMLDPSLTDWEGNSMFHIVARAKYNSTTQKATELLCDKKVSALRYNNEGKLPKDYLNKKND RRLQFFRLASVGSTAEKPAPKKKQEKKVSESEGGTSKEIDDEVAAIVKEAEENNNDKSPKQPKSQSHMEKAVTERKIERV LPAKASQRREAIRGHIEDMIYSLPDIPYSIFNPRQPVLGDDNMLKKLRQKRQQSQEEAVKKEPEKQVQPATVECAGAKVE EKIEEEEEGEEDEDIITEEQEEFTFDPQVFDNMEWEVECTADVWRTLRDKHVLPELKQRVIRKIQLLAKGEWRPHLCKEL KNVPETLKLYEAKLSKGGRILWELAIAFSPRLSESAERRLQLGDTDKEQPVRGGRIYSEVIRVWDVIFDHDKIYRSVQRI IKSHHRGEECIIQKKLKGIKQEQFQGGVTRRIPMIFTETDAGLDQREVQEWQQELQKYFPPASSNETEYHILKFYAFSSN LVSHVLQNLEMKVDFPFRVTDLEHAIINLQSNAPILLLDVDEDVEDLEEEEDNVEPTPGSSDQVDPEAEGEGGGQIYDHL QQLFITKNSVLCAEVQKNFRELSHACDLAKDHVAMEMQGLPYRLQDVNEFQFPLFITSRQLLLMLDASLEPPYFFKRNED GSMRMXDSPLSYHPLMEDDSEDEDEKFEDNEMDEDLDIEGEGPQNPAAKQKVDPRREVTYQVYQLTHNYRSHAGILSLAS SILDLMIEFFPESFDRLGKDQGLFQGPAPVLLESCSFSDLAMLLRGNKRKTSHIEFGAHQAILVVNDAARENIPEELQLG LILTIYEAKGLEFDDILLYNFFNDSQANKEWRVITEYLERLYSTHTEKTTKAMSESSLVELDAEILQQSGRPRALTFDPN QHKVLNSELKHLYTAVTRARVNVWVFDSHLEKRAPMFEYFKARKLVRSITSEDVEGEQYEEASDLYAIQGMTKEALECAR KSGNKWLIGKSLLIDATLAVRKHELHHNPDALENICQDLETAFDLFQQQDRKDEAGEASLLRGQITGKIVFLKKAFGAFS NSIVKNEAGMLECMDWMVNHSDLYDDKSYENLRQVIKGMANLFGILRVLMKQKDEQERTREEKILRFYGLTYSPDRLFLI VCPQQKPMALKMLRKVMSETNRKSMRCEIPLEKALPEVCRFLVERGLEWKVIIDTALFKIRESKRQCPDYALGRPCRRGR MSEDTEDLVTMENCTNFHSEFSYEQHNALLDADEMMIMLDYYVQHGVHDLDLLGTQEILQELNLQRFVPRTFEAKYVSCT NFIQDLIPDHCFLSVASCNLARAKDLKSWFSTRKRWFKEFFASYLTDFYMDMKKEERGWNTKFFVRFMILHQLMDVKMKD QKPSRVMARFEKEIKDEFEKKFPNIRTLRKTVESLGFITEEMERKLHIECLSHRFYDAFDKLSGLNNEPSEALIAFSRYV TMLGKVKKTLLMPYYGDFIIWLEFFTTVTMSLIAKTYHGDSFFFVLPESYISTVYFVDATFMQEQGVPTFEAIQRFRIWR SFRYDHFPQRLGYITRMLWSESGNRNLIRMLFKTNAEDGCIKEGNYGFAERVLTLALVCLCNIGHSISADKESEFMKQIY KIKIRDSYPPRLCRVLNAVQQAQSQQEVASALMALLRERENEKLLYCEWRGGREGIWHEPLLIKHLNSEFYNDITVSYRV DPFVVEGGVAEEDNEPLVNEDDLLEDLSITMEEKIKRDRQQREEEMQEKQKHAAGCILRCTRSFLLRIKVAEKGKLKFLV EKQLNSEKKKLKMKIFESAEIFETHCGVCGVPFFVPEVKVERSYGIDSEHSLLQRQQSTSNQTLENETMIEHINSIRHKD KVRDYQMFRMKFSRHLTNDLEEITEFIQKFKLNTNAGSYPDHAYAIDRMLRTKQEADAELRRIVDDKNWSGNQKFVEKLK ESKGDFLQVRSYVEETAKAHRKEKERSKAELASKLPSRDSPENWEEELVEVIPAVDDPSLRKSRNNPGKGRGRGRGKKKE NK |
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