Gene
| Gene Model ID | pfu_aug1.0_2702.1_30222 |
|---|---|
| Locus | scaffold2702.1 : 13256 ... 22474 : + |
| To GenomeBrowser | scaffold2702.1:13256..22474 |
| Genes list of scaffold | scaffold2702.1 |
| Synonym | pfu_aug2.0_233.1_10476 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2702.1_30222.t1 | 1 | 1 | Lectin_C | 1 | 100 | 3.1e-11 | 43.8 | 2.4e-15 | 3.5e-11 | 43.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2702.1_30222.t1 | gi|322966877|sp|P86854.1|PLCL_MYTGA | Perlucin-like protein [Mytilus galloprovincialis] | 6.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2702.1_30222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2702.1_30222.t1 atgggaagttacttggtaagggtgaatgattttaaagaaaacgaatggatcaagatccagatcagatctacagtgcgctg gaacacttggactggtggtgttgactttggtcatgaaggaaaatggaagtgggaatctaatggaaaatcggtagcatatc gagatttcattagaggtcaaccaaacaatgttggcaataatgagcattgcttggaattctatggttctggttctgtacat tcgtacaagtggaacgaccataactgtggtaaccataaggcatactctttatgtgagaagaacagaattgttgccctcag tacgaaaacctag |
|
Protein
| Protein ID | pfu_aug1.0_2702.1_30222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2702.1_30222.t1 MGSYLVRVNDFKENEWIKIQIRSTVRWNTWTGGVDFGHEGKWKWESNGKSVAYRDFIRGQPNNVGNNEHCLEFYGSGSVH SYKWNDHNCGNHKAYSLCEKNRIVALSTKT |
|