Gene
| Gene Model ID | pfu_aug1.0_2653.1_15883 |
|---|---|
| Locus | scaffold2653.1 : 30616 ... 40317 : + |
| To GenomeBrowser | scaffold2653.1:30616..40317 |
| Genes list of scaffold | scaffold2653.1 |
| Synonym | pfu_aug2.0_252.1_07245 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2653.1_15883.t1 | 3 | 1 | zf-H2C2_2 | 328 | 343 | 2.3e-06 | 27.5 | 0.018 | 25.0 | 5.4 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 1 | zf-C2H2 | 334 | 356 | 3.7e-08 | 33.2 | 7.6e-07 | 0.001 | 19.2 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 1 | zf-C2H2_4 | 334 | 356 | 1.1e-06 | 28.5 | 5.2e-06 | 0.007 | 16.6 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 2 | zf-H2C2_2 | 347 | 385 | 2.3e-06 | 27.5 | 0.00044 | 0.59 | 10.5 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 2 | zf-C2H2 | 374 | 396 | 3.7e-08 | 33.2 | 3.3e-06 | 0.0044 | 17.2 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 2 | zf-C2H2_4 | 374 | 396 | 1.1e-06 | 28.5 | 0.0036 | 4.8 | 7.7 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 3 | zf-H2C2_2 | 388 | 411 | 2.3e-06 | 27.5 | 7.3e-08 | 9.8e-05 | 22.4 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 3 | zf-C2H2 | 402 | 425 | 3.7e-08 | 33.2 | 3.6e-05 | 0.049 | 13.9 |
| pfu_aug1.0_2653.1_15883.t1 | 3 | 3 | zf-C2H2_4 | 402 | 425 | 1.1e-06 | 28.5 | 6.8e-05 | 0.092 | 13.1 |
Transcript
| Transcript ID | pfu_aug1.0_2653.1_15883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2653.1_15883.t1 atggttgtggatctacagtctcaaaacccttgtacggtgccgtccgattctgccatccattcatctccacatgattataa aatgatgtcaagtgaccgtcctcaagagtcatctccccatgaatacaaacttttgccaccagagggcgttgttactccta gtcctgataaccctccaacaatagactattctgatgttccaaaggagagctcgtgtgttgagtcaatgagtcctccaagg agtcctccaaacttgagtccagagccttttgataatgaggaccaagatagtagtcctaataactcaccaagtcaatctcc tgacaagcataggtccaggaggaagccaactctagaggacattgtccgcaggatgaggaatgttgaggatggaacagaca gtgaggaggaagaaatgatggaggatgaggacataaatggttctctgattggagttgaggacagagaggacatcaggagg agtgaggaagttggcagggaaatagccaatggctatgggcaggatgaagtggatggagaattcatcaggagacggctaga gatgatggaggataaagtagtcaaagatatgaaggaaagtaaagactttatagaaaacaacactgaaccaagcagtatgt ctctccatggtgctggaaatgctaaggagggagagttgaaaggcatacctaatggcttccatgatatgggtgaaaatata agtagagaagcattggaggaaaaactgaaacaggaacgtttaaacgatcatactgctgacaagcttgctgaaatatctgc cctcgcagacaaagtaacaaaacctgctgacttccaaggtgcacccaaaattaacggtaactggttccatggggcttttg ggagtcttcctatatttccattttcccaaaacccgatggagcaccctctgaattccaactttcttccattttttgacggc aagttttccagtccacaagaagtggaaaaagactacttaaagtgccagttctgtgaaagaacctttcgtagacagaaaaa tctagagaatcacatagagaatacacatcatggaaaaggaacaccgaaacgcaaatctgagaacagctcggatatgtact ttaaatgcactcattgtccatacacaaccaagcaccaaagtaacctatatgtccacctgaggatccatacaggtgagaga ccttacatctgtggagcctgtggtgtacagtacagccaaagtcacagtctgaaaagtcacatcattaacaagcacgatgg catcatgtcttactacataaaggagaagcgaaaccgttctccccgcggcatgggatacctgcagcacgtggtacctgatg tcataggcttcaagtcctccagctctcctaccatggtaccacctcagaatttacagaactccccacagcaaggtcaaggt catgcaccaccgtcacctaggcaacaagcacctcagttgccaccacagcagccattactaatgccaaggtcattgatgcc ccagcaacatcccatgatgatgtctccacagaatcttcctcagttgtctcctcagatgaacaagtcaccacatctgtcgc cagggcaacagcgacctttgaccccttctaatcatttcgtacaacatggtatgccaccaaaatctagtccaaacatgtac atgaatggacacacatcaccagtatttaaccacaataataacattctcaacaaactttacatgcagtcagaacagatgca acctttgtctcttgttgcccaccacaaagctccacaaccattgcaggaaattcaaaataatgagcaggagggcaactttg gtgctatagacttgaccaaaaaagtaatccacaatggggcagtggactgcacaccaaccgatcaagataaactgttgaag tatgcagattctaataatgcagagacaaaaacttgtggaaactgtccacatgcagctaagcttcgcctgctgagaaagaa tgtggtgcggatgctgagcattttggtcccaaatttgaatttcgaagagaaaggtattagtgccgacggtgattctgtgg atgaactccttcatgacgtcattgaaagcaacatgcaggaagaggagtgcttcgattaa |
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Protein
| Protein ID | pfu_aug1.0_2653.1_15883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2653.1_15883.t1 MVVDLQSQNPCTVPSDSAIHSSPHDYKMMSSDRPQESSPHEYKLLPPEGVVTPSPDNPPTIDYSDVPKESSCVESMSPPR SPPNLSPEPFDNEDQDSSPNNSPSQSPDKHRSRRKPTLEDIVRRMRNVEDGTDSEEEEMMEDEDINGSLIGVEDREDIRR SEEVGREIANGYGQDEVDGEFIRRRLEMMEDKVVKDMKESKDFIENNTEPSSMSLHGAGNAKEGELKGIPNGFHDMGENI SREALEEKLKQERLNDHTADKLAEISALADKVTKPADFQGAPKINGNWFHGAFGSLPIFPFSQNPMEHPLNSNFLPFFDG KFSSPQEVEKDYLKCQFCERTFRRQKNLENHIENTHHGKGTPKRKSENSSDMYFKCTHCPYTTKHQSNLYVHLRIHTGER PYICGACGVQYSQSHSLKSHIINKHDGIMSYYIKEKRNRSPRGMGYLQHVVPDVIGFKSSSSPTMVPPQNLQNSPQQGQG HAPPSPRQQAPQLPPQQPLLMPRSLMPQQHPMMMSPQNLPQLSPQMNKSPHLSPGQQRPLTPSNHFVQHGMPPKSSPNMY MNGHTSPVFNHNNNILNKLYMQSEQMQPLSLVAHHKAPQPLQEIQNNEQEGNFGAIDLTKKVIHNGAVDCTPTDQDKLLK YADSNNAETKTCGNCPHAAKLRLLRKNVVRMLSILVPNLNFEEKGISADGDSVDELLHDVIESNMQEEECFD |
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