Gene
| Gene Model ID | pfu_aug1.0_26143.1_04501 |
|---|---|
| Locus | scaffold26143.1 : 1 ... 4434 : + |
| To GenomeBrowser | scaffold26143.1:1..4434 |
| Genes list of scaffold | scaffold26143.1 |
| Synonym | pfu_aug2.0_252.1_07232 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_26143.1_04501.t1 | 2 | 1 | BEN | 112 | 128 | 2.6e-09 | 37.0 | 0.52 | 2600.0 | -1.5 |
| pfu_aug1.0_26143.1_04501.t1 | 2 | 2 | BEN | 189 | 258 | 2.6e-09 | 37.0 | 1.9e-12 | 9.4e-09 | 35.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_26143.1_04501.t1 | gi|301615495|ref|XP_002937205.1| | PREDICTED: BEN domain-containing protein 3 [Xenopus (Silurana) tropicalis] | 8.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_26143.1_04501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26143.1_04501.t1 gtgattcttcacgaatatctactttcctgagttcttccacagtattcacagaagttgagaaaaacaggaaatcagacaga gggaaatcactacccctcacaaggcctgctgtatcaacagacagtaagggattagatgtgcagacttctgacttgatagg gaaatcattaactctcttgaattcgctaccaatgaccttggaaaatcctacattgaaaggtgcatctgaaatagtagagt caaatttgagtgaaaccgaaagttcgaacagagtgtataatgtttccgaaactgcaagcaatcgccaagaaaaggagtca acacaatcggcaaatgaaagtaaaaaactcatggatgtacttggaaaaatagacaaaaaactggagtttctaagcagacg agtgactgctatagaggtggaaaagaaacaaggaaatgacgctgccagtacaacatatcttcaatatgtcccggatgtac cgtcaaccacagaaattccagaaaaatatcgcaccgatatggaaacgcttaaagacattgagagaaatgcgaagcaaaat ccaggaaactttgctttgaaattaacccaaagattcttccctgaactctttggtccagattgtctcaggaagaaatttaa ttggtatggttcactgaataaaaagagactggacccagtcaggtgtaacgtcatcagacattacgtcagcatcttttatc cggaaataaatgatgaaaatattttcaaaagaacagtcgtacttggtgtgaatgagggactcagaagatataaggtgaag gtaaaacgttga |
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Protein
| Protein ID | pfu_aug1.0_26143.1_04501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26143.1_04501.t1 DSSRISTFLSSSTVFTEVEKNRKSDRGKSLPLTRPAVSTDSKGLDVQTSDLIGKSLTLLNSLPMTLENPTLKGASEIVES NLSETESSNRVYNVSETASNRQEKESTQSANESKKLMDVLGKIDKKLEFLSRRVTAIEVEKKQGNDAASTTYLQYVPDVP STTEIPEKYRTDMETLKDIERNAKQNPGNFALKLTQRFFPELFGPDCLRKKFNWYGSLNKKRLDPVRCNVIRHYVSIFYP EINDENIFKRTVVLGVNEGLRRYKVKVKR |
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