Gene
| Gene Model ID | pfu_aug1.0_2609.1_37332 |
|---|---|
| Locus | scaffold2609.1 : 83725 ... 131555 : - |
| To GenomeBrowser | scaffold2609.1:83725..131555 |
| Genes list of scaffold | scaffold2609.1 |
| Synonym | pfu_aug2.0_60.1_00150 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2609.1_37332.t1 | 1 | 1 | DEAD | 86 | 232 | 6.8e-39 | 133.0 | 3.00018e-42 | 1.5e-38 | 131.9 |
| pfu_aug1.0_2609.1_37332.t1 | 1 | 1 | Helicase_C | 215 | 280 | 4.1e-16 | 58.5 | 2.2e-19 | 1.1e-15 | 57.2 |
| pfu_aug1.0_2609.1_37332.t1 | 2 | 1 | DBP10CT | 493 | 508 | 1.9e-15 | 56.3 | 0.38 | 1900.0 | -1.3 |
| pfu_aug1.0_2609.1_37332.t1 | 2 | 2 | DBP10CT | 550 | 601 | 1.9e-15 | 56.3 | 3.9e-19 | 1.9e-15 | 56.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2609.1_37332.t1 | gi|344295386|ref|XP_003419393.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2609.1_37332.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2609.1_37332.t1 atgacacagctaagtaactgtacacggaccctgggtattgttacagtcatactcctccttctgtcgttcgccctgaccct ggtaggagcggccacaccctactggtttgatgtgggatcctatacaaagggcttgtttcagtattgtagtacagagaaca gcgtgtgtgacgatgtcagtgcatatcttactacagataaaggtctttcacaccatgtgtataaaggcataatcaggaaa ggctataaaattcccacaccgatacagagaaagaccatcccaattatcttagatggcaaagatgtggttgccatggcaag gacaggaagtggtaaaacggcagcttttctgatcccaatgtttgagaggttgaagtcccacacaggcgtggccggagccc gagcattagtcttgtcacctaccagggaactggctctacagactctcaaattcacaaaggagatagggaaatacctcaat cttagggcagctgttatattaggtggagataaaatggatgaccagtttgcagctttgcatgaaaatccagatatcatcat cgccacacccggccgtttgttacacgtactaatggagatggacctcaaactgaaatgtgtggagtatgtggtatttgacg aggcagacagctccttggaccaggctgctagaaaaataaacgtggccaaattccagcataaaaaggtcaaggtcatgata gtaactgaccttgcagcacgtggtatagatattcctctcctggacaatgttatcaactataacttccctgcaaaggcaaa attgtttgtacatagagttggtagagttgcccgtgctggtcgatcaggtacagctttcactatgctatctgtagaagaaa tgccgttcttactggatttgtacgtcttccttggaaggaatctcaaatttgtgtcctcagaaaaaaaggttgaagatgag gatggtctatgtggagagatacctcagacagttatagatgatatggaggaacagctaaggttatggcacgcagactccgc tgaactggttggtatgaagaaagtgtgtgttaatgccatgaagaagtatgtcaagtcccgcccagcacctgcaccggaat ctataaaacgcttcaaggagatgaaccagaatggatttacaatgggcatccatcctttatttatattagcaggtggtgat gaggagcaggagaggcagtccctactgaaggctctaaaatcctacaaagccaataataccatctttgaagtgaacacgac agcaaaaacacaggcatttgacatcatgaagaagaaaagaaggtggcaccaggacgttatcgagaaacggcaccagaact atgaggatcatttagctagtcagaaaccacaggatgaggatcgacctgaaacgacccttaatactgcagatgaaaatgat cttgagaatgccttcagtgttgtgattgggtcaaagaggaaacatcagcagtttgtgtttgagccaaagaaaaagaagaa aatttcaacaagggatgaagaaaacttccttcattacagaccgaaagactttcagtcggagagaggtctaagtttaacat caggatttgaccaggaggcatctggtgctatactggacgtcagtggtgcagatgaccgtttaaataacaggaacaagtca catgtacgatgggatagaaagaagaagaaatttgtaaatgttggtgatgtcgaagccaagaagaaaaagatccgcacaga aagtggagctcttatctcagcatcgtacaagtcacatgcatatcctttaatgatatga |
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Protein
| Protein ID | pfu_aug1.0_2609.1_37332.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2609.1_37332.t1 MTQLSNCTRTLGIVTVILLLLSFALTLVGAATPYWFDVGSYTKGLFQYCSTENSVCDDVSAYLTTDKGLSHHVYKGIIRK GYKIPTPIQRKTIPIILDGKDVVAMARTGSGKTAAFLIPMFERLKSHTGVAGARALVLSPTRELALQTLKFTKEIGKYLN LRAAVILGGDKMDDQFAALHENPDIIIATPGRLLHVLMEMDLKLKCVEYVVFDEADSSLDQAARKINVAKFQHKKVKVMI VTDLAARGIDIPLLDNVINYNFPAKAKLFVHRVGRVARAGRSGTAFTMLSVEEMPFLLDLYVFLGRNLKFVSSEKKVEDE DGLCGEIPQTVIDDMEEQLRLWHADSAELVGMKKVCVNAMKKYVKSRPAPAPESIKRFKEMNQNGFTMGIHPLFILAGGD EEQERQSLLKALKSYKANNTIFEVNTTAKTQAFDIMKKKRRWHQDVIEKRHQNYEDHLASQKPQDEDRPETTLNTADEND LENAFSVVIGSKRKHQQFVFEPKKKKKISTRDEENFLHYRPKDFQSERGLSLTSGFDQEASGAILDVSGADDRLNNRNKS HVRWDRKKKKFVNVGDVEAKKKKIRTESGALISASYKSHAYPLMI |
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